Gen3 Monthly Release 2023.03 chorus.data-commons.org 1678246614

[PlanXCyborg]

Applying version 2023.03 to chorus.data-commons.org

[PlanXCyborg]

chorus.data-commons.org

❌ etlMapping.yaml - gitops.json mismatch

• Field error: Field [node_id] in explorerConfig.charts not found in etlMapping

[PlanXCyborg]

chorus.data-commons.org/manifest.json

Deployment changes

• fence
  • Requires a Fence DB migration (PXP-10541 Client credentials rotation fence#1068)
• peregrine
  • Peregrine does not rely on configuration files in the cloud-automation repository anymore. The Peregrine configuration files are in the Peregrine repository. (PXP-10163 Python 3.9 peregrine#191)
• sheepdog
  • Sheepdog does not rely on configuration files in the cloud-automation repository anymore. The Sheepdog configuration files are in the Sheepdog repository. (PXP-6245 PXP-9633 Poetry + Python 3.9 sheepdog#387)

Breaking changes

• indexd
  • Ensure you are using Fence>=2021.10. Remove deprecated GA4GH access endpoints. these have existed (and been used) from the Fence microservice since last year. See cloud automation change here (Revert "Revert "fix(migrate): improve acl->authz migration, remove de… indexd#338)