Gen3 Monthly Release 2021.11 data.bloodpac.org 1638228381

[PlanXCyborg]

Applying version 2021.11 to data.bloodpac.org

[PlanXCyborg]

data.bloodpac.org/manifest.json

Deployment changes

• fence
  • Requires these cloud-automation updates to revproxy: (PXP-7565): Exclude Fence register-user blueprint from CSRF check cloud-automation#1580 ((PXP-7565): User registration, plus CSRF changes fence#906)
• hatchery
  • Add pay-models-dynamodb-table to the Hatchery configuration file to fetch pay model data from DynamoDB (PXP-8341 Fetch pay models from DynamoDB hatchery#35)
  • Update the Hatchery configuration file pay-models block to change the user field name to user_id (PXP-8341 Fetch pay models from DynamoDB hatchery#35)
• indexd
  • Include example secrets to load PostgreSQL settings for indexd (Add files for psql ssl support indexd#317)
• metadata
  • A job has been created to make aggregate MDS population more robust feat(agg-mds-job): add new agg mds job cloud-automation#1722 (feat(populate): improved populate script, docs metadata-service#33)
  • Must set the appropriate AGG_MDS_NAMESPACE value in metadata.env (Feat/mds adapter metadata-service#29)
  • Per chore(metadata): migrate agg MDS configs #3332 a metadata/aggregate_config.json file should be created as part of the manifest config for a commons and the appropriate environment vars for metadata should be defined in the manifest JSON (chore(configs): remove configs from source control metadata-service#30)
  • The new command to populate an aggregate MDS is kubectl exec $(gen3 pod metadata) -- python /src/src/mds/populate.py --config /aggregate_config.json --hostname esproxy-service --port 9200 (chore(configs): remove configs from source control metadata-service#30)
• portal
  • The pay model support depends on this PR: PXP-8779 HP-347 Feat/ecs hatchery#38 (PXP-8520 Feat/paymodels data-portal#900)
  • set "showExternalLoginsOnProfile": true for showing external logins on the profile page (Feat/profile fed auth data-portal#934)
  • Discovery: introduced a new config section discoveryConfig.features.search.tagSearchDropdown, see portal-config.md for more info (HP-555 Feat/disco tag dropdown viewer data-portal#927)
  • To enable this check, set features.exportToWorkspace.verifyExternalLogins flag to true in gitops (Check all WTS OIDCs are signed in before download/export to WS data-portal#921)
  • Misc: add option for bundle name: ecosystem, which is the same as heal bundle under the hood (Chore/discovery for more bundles data-portal#918)
  • Requires loginForDownload flag set to true in gitops (PXP-8448 - Register users for download data-portal#912)
  • User registration before download feature depends on (PXP-7565): User registration, plus CSRF changes fence#906 (PXP-8448 - Register users for download data-portal#912)
  • Requires the configuration of the batch-export sower job: Batch export sower job sower-jobs#29 in the environment's manifest. This job also has its own setup in cloud automation: Feat/batch export cloud-automation#1708 (Add UI components and polling for zip downloads data-portal#906)
  • 2 new fields in gitops.json: discoveryconfig.features.exportToWorkspace.[enableDownloadZip (bool) downloadZipButtonText (string)] (Add UI components and polling for zip downloads data-portal#906)
  • Requires PXP-8364 Fix/portal csp cloud-automation#1687, otherwsie Indexing page may not work properly (PXP-8364 fix: strict csp data-portal#893)
  • Portal config field discoveryConfig.features.exportToWorkspaceBETA has been renamed to discoveryConfig.features.exportToWorkspace (HP-255 HEAL UI updates with adaptations to ecosystems UI data-portal#876)
  • Note that there are several other new configurations introduced for the Discovery page, please refer to this diff (HP-255 HEAL UI updates with adaptations to ecosystems UI data-portal#876)
  • New GEN3_BUNDLE option heal introduced for buliding a HEAL bundle (HP-255 HEAL UI updates with adaptations to ecosystems UI data-portal#876)

[trevars]

Spoke with OCC. Looks good to go.