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Submodule svtyper
updated
24 files
| +54 −0 | .travis.yml | |
| +57 −17 | README.md | |
| + − | etc/het.png | |
| + − | etc/hom_alt.png | |
| + − | etc/hom_ref.png | |
| + − | etc/my.bam.json.pdf | |
| + − | etc/my.bam.json.png | |
| +1 −0 | requirements.txt | |
| +0 −424 | scripts/batchtyper | |
| +48 −0 | scripts/lib_stats.R | |
| +0 −19 | scripts/sv_counts.sh | |
| +1,130 −522 | svtyper | |
| +808 −0 | test/NA12878.bam.json | |
| + − | test/NA12878.target_loci.sorted.bam | |
| + − | test/NA12878.target_loci.sorted.bam.bai | |
| +0 −716 | test/NA12893.het.vcf | |
| +0 −92 | test/NA12893.hom.vcf | |
| +354 −0 | test/example.gt.vcf | |
| +344 −0 | test/example.vcf | |
| +0 −14 | test/results.txt | |
| +0 −37 | test/run_svtyper.sh | |
| +1 −0 | test/svtyper.py | |
| +24 −0 | test/test.sh | |
| +51 −0 | test/test_svtyper.py |