Add test for BI-2057.

src/features/BI-2057.feature

@@ -0,0 +1,35 @@
+Feature: Sample Tracking
+
+  @BI-2057
+  @debug
+  Scenario: Sample Tracking
+    Given a new program is created
+    Given user logs in as "Cucumber Breeder"
+    When user selects "*" on program-selection page
+    And user selects "Import Data" in top-level navigation
+    And user uploads Germplasm "GermplasmSample.xlsx" file
+    And user selects 'Import' button
+    When user sets "GermplasmSort" in List Name field of import page
+    When user sets "GermplasmSort" in List Description field of import page
+    And user selects "Confirm" button
+    # When user selects "Experiments & Observations" in navigation
+    # When user selects "Import Experiments & Observations" button
+    # And user uploads Experiments & Observations "EXP.csv" file
+    # When user selects 'Import' button
+    # And user selects "Confirm" button
+    When user selects "Sample Management" in navigation
+    When user selects "Import Sample Submission" button
+    And user uploads Genotype Sample "bi_sample_submission.xls" file
+    When user selects 'Import' button
+    When user sets "Sample" in Project Name field of import page
+    And user selects "Confirm" button
+    And user pause for "10" seconds
+    When user selects "Sample Management" in navigation
+    Then user can see row "1" rows in a table
+    Then user can see "Project Name" column header
+    Then user can see "Created Date" column header
+    Then user can see "Created By" column header
+    Then user can see "Submission Status" column header
+    Then user can see "Submitted Date" column header
+    Then user can see "Vendor Order ID" column header
+    Then user can see "Vendor Status" column header

src/features/BI-2160.feature

@@ -4,7 +4,6 @@ Feature: Display the full name in the table and details pane for ontology
         Given a new program is created
 
     @BI-2160
-    @debug
     Scenario Outline: Display the full name in the table and details pane for ontology
         Given user logs in as "Cucumber Breeder"
         When user selects "*" on program-selection page

src/features/BI-2164.feature

@@ -4,7 +4,6 @@ Background: Create a new list referencing existing GIDs
 
 
     @BI-2164
-    @debug
     @BUG_BI-2260
     Scenario Outline: All of the information associated with a Germplasm Details page
         Given a new program is created

src/files/ExperimentsImport/BI-1146-multi-exp-test.csv

@@ -2,4 +2,4 @@ Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Ex
 Test,1,C,Trial 5 test2,second trial test,plot test2,phenotyping test,New Study test2,New Location test2,2020,1 - test2,0,2,4,50,Jam application,
 Test,1,T,Trial 5 test2,second trial,plot test2,phenotyping test,Study two test2,Location Two test2,2020,2 - test2,0,2,4,51,Jelly application,
 Test,1,C,Trial 5 test2,second trial,plot test2,phenotyping test,Study three test2, Location Three test2,2020,2 - test2,0,2,4,52,Juice application,
-Test,1,                     ,Trial 5 test2,second trial,plot test2,phenotyping test,Study four test2, Location Three test2,1958,1 - test2,0,2,4,53,EATING application,
+Test,1,                     ,Trial 5 test2,second trial,plot test2,phenotyping test,Study four test2, Location Three test2,1958,1 - test2,0,2,4,53,EATING application,

src/files/ExperimentsImport/BI-1146-starter.csv

@@ -1,2 +1,2 @@
-Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Exp Unit,Exp Type,Env,Env Location,Env Year,Exp Unit ID,Exp Replicate #,Exp Block #,Row,Column,Exp Trt Factor Name,ObsUnitID,Treatment Factors
-Test,1,C,New Trial DRP45,A new trial DRP5,plot,phenotyping,New Study DRP5,New Location DRP5,1993,9393,1,2,4,5,Jam application,test,test
+Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Exp Unit,Exp Type,Env,Env Location,Env Year,Exp Unit ID,Exp Replicate #,Exp Block #,Row,Column,Exp Trt Factor Name,Treatment Factors,ObsUnitID
+Test,1,C,New Trial DRP45,A new trial DRP5,plot,phenotyping,New Study DRP5,New Location DRP5,1993,9393,1,2,4,5,Jam application,test,

src/files/ExperimentsImport/EXP - Case.csv

@@ -0,0 +1,5 @@
+Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Exp Unit,Exp Type,ENV,Env Location,ENV YEAR,Exp Unit ID,Exp Replicate #,Exp Block #,Row,Column,Lat,Long,Elevation,RTK,Treatment Factors,ObsUnitID
+Germplas127,1,C,New Trial DRP1,A new trial DRP,plot,phenotyping,New Study 15,New Location DRP6,2000,9390,1,2,4,5,,,,,Jam application,
+Germplas128,2,C,New Trial DRP1,A new trial DRP,plot,phenotyping,New Study 16,New Location DRP7,2000,9391,1,2,4,5,,,,,Jam application,
+Germplas129,3,C,New Trial DRP1,A new trial DRP,plot,phenotyping,New Study 17,New Location DRP8,2000,9392,1,2,4,5,,,,,Jam application,
+Germplas130,4,C,New Trial DRP1,A new trial DRP,plot,phenotyping,New Study 18,New Location DRP9,2000,9393,1,2,4,5,,,,,Jam application,

src/files/ExperimentsImport/EXP.csv

@@ -1,5 +1,5 @@
-Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Exp Unit,Sub-Obs Unit,Exp Type,Env,Env Location,Env Year,Exp Unit ID,Sub Unit ID,Exp Replicate #,Exp Block #,Row,Column,Lat,Long,Elevation,RTK,Treatment Factors,ObsUnitID
-Germplas127,1,C,New Trial DRP1,A new trial DRP,plot,,phenotyping,New Study 15,New Location DRP6,2000,9390,,1,2,4,5,,,,,Jam application,
-Germplas128,2,C,New Trial DRP1,A new trial DRP,plot,,phenotyping,New Study 16,New Location DRP7,2000,9391,,1,2,4,5,,,,,Jam application,
-Germplas129,3,C,New Trial DRP1,A new trial DRP,plot,,phenotyping,New Study 17,New Location DRP8,2000,9392,,1,2,4,5,,,,,Jam application,
-Germplas130,4,C,New Trial DRP1,A new trial DRP,plot,,phenotyping,New Study 18,New Location DRP9,2000,9393,,1,2,4,5,,,,,Jam application,
+Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Exp Unit,Exp Type,Env,Env Location,Env Year,Exp Unit ID,Exp Replicate #,Exp Block #,Row,Column,Lat,Long,Elevation,RTK,Treatment Factors,ObsUnitID
+Germplas127,1,C,New Trial DRP1,A new trial DRP,plot,phenotyping,New Study 15,New Location DRP6,2000,9390,1,2,4,5,,,,,Jam application,
+Germplas128,2,C,New Trial DRP1,A new trial DRP,plot,phenotyping,New Study 16,New Location DRP7,2000,9391,1,2,4,5,,,,,Jam application,
+Germplas129,3,C,New Trial DRP1,A new trial DRP,plot,phenotyping,New Study 17,New Location DRP8,2000,9392,1,2,4,5,,,,,Jam application,
+Germplas130,4,C,New Trial DRP1,A new trial DRP,plot,phenotyping,New Study 18,New Location DRP9,2000,9393,1,2,4,5,,,,,Jam application,

src/files/ExperimentsImport/EXP2.csv

@@ -1,5 +1,5 @@
-Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Exp Unit,Sub-Obs Unit,Exp Type,Env,Env Location,Env Year,Exp Unit ID,Sub Unit ID,Exp Replicate #,Exp Block #,Row,Column,Lat,Long,Elevation,RTK,Treatment Factors,ObsUnitID
-Germplas127,1,C,New Trial DRP2,A new trial DRP,plot,,phenotyping,New Study 15,New Location DRP6,2000,9390,,1,2,4,5,,,,,Jam application,
-Germplas128,2,C,New Trial DRP2,A new trial DRP,plot,,phenotyping,New Study 16,New Location DRP7,2000,9391,,1,2,4,5,,,,,Jam application,
-Germplas129,3,C,New Trial DRP2,A new trial DRP,plot,,phenotyping,New Study 17,New Location DRP8,2000,9392,,1,2,4,5,,,,,Jam application,
-Germplas130,4,C,New Trial DRP2,A new trial DRP,plot,,phenotyping,New Study 18,New Location DRP9,2000,9393,,1,2,4,5,,,,,Jam application,
+Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Exp Unit,Exp Type,Env,Env Location,Env Year,Exp Unit ID,Exp Replicate #,Exp Block #,Row,Column,Lat,Long,Elevation,RTK,Treatment Factors,ObsUnitID
+Germplas127,1,C,New Trial DRP2,A new trial DRP,plot,phenotyping,New Study 15,New Location DRP6,2000,9390,1,2,4,5,,,,,Jam application,
+Germplas128,2,C,New Trial DRP2,A new trial DRP,plot,phenotyping,New Study 16,New Location DRP7,2000,9391,1,2,4,5,,,,,Jam application,
+Germplas129,3,C,New Trial DRP2,A new trial DRP,plot,phenotyping,New Study 17,New Location DRP8,2000,9392,1,2,4,5,,,,,Jam application,
+Germplas130,4,C,New Trial DRP2,A new trial DRP,plot,phenotyping,New Study 18,New Location DRP9,2000,9393,1,2,4,5,,,,,Jam application,

src/files/ExperimentsImport/EXPBad.csv

@@ -1,5 +1,5 @@
-Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Exp Unit,Sub-Obs Unit,Exp Type,Env,Env Location,Env Year,Exp Unit ID,Sub Unit ID,Exp Replicate #,Exp Block #,Row,Column,Lat,Long,Elevation,RTK,Treatment Factors,ObsUnitID
-Germplas140,1,C,New Trial DRP,A new trial DRP,plott,,phenotyping,New Study 15,New Location DRP6,2000,9390,,1,2,4,5,,,,,Jam application,
-Germplas141,2,C,New Trial DRP,A new trial DRP,plot,,phenotyping,New Study 16,New Location DRP7,2000,9391,,1,2,4,5,,,,,,
-Germplas142,,C,New Trial DRP,A new trial DRP,plot,,phenotyping,New Study 17,New Location DRP8,,9392,,1,2,4,5,,,,,Jam application,
-Germplas143,4,C,New Trial DRP,A new trial DRP,3,,phenotyping,,New Location DRP9,2000,9393,,1,2,4,5,,,,,Jam application,
+Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Exp Unit,Exp Type,Env,Env Location,Env Year,Exp Unit ID,Exp Replicate #,Exp Block #,Row,Column,Lat,Long,Elevation,RTK,Treatment Factors,ObsUnitID
+Germplas140,1,C,New Trial DRP,A new trial DRP,plott,phenotyping,New Study 15,New Location DRP6,2000,9390,1,2,4,5,,,,,Jam application,
+Germplas141,2,C,New Trial DRP,A new trial DRP,plot,phenotyping,New Study 16,New Location DRP7,2000,9391,1,2,4,5,,,,,,
+Germplas142,,C,New Trial DRP,A new trial DRP,plot,phenotyping,New Study 17,New Location DRP8,,9392,1,2,4,5,,,,,Jam application,
+Germplas143,4,C,New Trial DRP,A new trial DRP,3,phenotyping,,New Location DRP9,2000,9393,1,2,4,5,,,,,Jam application,

src/files/ExperimentsImport/EXPBadTitle.csv

@@ -1,5 +1,5 @@
-Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Exp Unit,Sub-Obs Unit,Exp Type,Env,Env Location,Env Year,Exp Unit ID,Sub Unit ID,Exp Replicate #,Exp Block #,Row,Column,Lat,Long,Elevation,RTK,Treatment Factors,ObsUnitID
-Germplas127,1,C,New Trial DRP,A new trial DRP,plot,multiple fruit,phenotyping,New Study 15,New Location DRP6,2000,9390,1,1,2,4,5,,,,,Jam application,
-Germplas128,2,C,New Trial DRP 1,A new trial DRP,plot,multiple fruit,phenotyping,New Study 16,New Location DRP7,2000,9391,2,1,2,4,5,,,,,Jam application,
-Germplas129,3,C,New Trial DRP,A new trial DRP,plot,multiple fruit,phenotyping,New Study 17,New Location DRP8,2000,9392,3,1,2,4,5,,,,,Jam application,
-Germplas130,4,C,New Trial DRP,A new trial DRP,plot,multiple fruit,phenotyping,New Study 18,New Location DRP9,2000,9393,1,1,2,4,5,,,,,Jam application,
+Germplasm Name,Germplasm GID,Test (T) or Check (C),Exp Title ,Exp Description,Exp Unit,Exp Type,Env,Env Location,Env Year,Exp Unit ID,Exp Replicate #,Exp Block #,Row,Column,Lat,Long,Elevation,RTK,Treatment Factors,ObsUnitID
+Germplas127,1,C,New Trial DRP,A new trial DRP,plot,phenotyping,New Study 15,New Location DRP6,2000,9390,1,2,4,5,,,,,Jam application,
+Germplas128,2,C,New Trial DRP 1,A new trial DRP,plot,phenotyping,New Study 16,New Location DRP7,2000,9391,1,2,4,5,,,,,Jam application,
+Germplas129,3,C,New Trial DRP,A new trial DRP,plot,phenotyping,New Study 17,New Location DRP8,2000,9392,1,2,4,5,,,,,Jam application,
+Germplas130,4,C,New Trial DRP,A new trial DRP,plot,phenotyping,New Study 18,New Location DRP9,2000,9393,1,2,4,5,,,,,Jam application,

src/page_objects/sampleManagementPage.js

@@ -0,0 +1,11 @@
+module.exports = {
+  url: function () {
+    return this.api.launchUrl;
+  },
+  elements: {
+    header: {
+      selector: "//h3[text()='Sample Management']",
+      locateStrategy: "xpath",
+    },
+  },
+};

src/step_definitions/importSteps.js

@@ -11,6 +11,7 @@ const experimentsFolder = path.join(
   "files",
   "ExperimentsImport"
 );
+const genotypeSamplesFolder = path.join(__basedir, "src", "files", "GenotypeSamplesImport");
 
 When(
   /^user sets "([^"]*)" in List Name field of import page$/,
@@ -271,15 +272,12 @@ When(
   }
 );
 
-When(
-  /^user uploads Sample Submission "([^"]*)" file$/,
-  async function (args1) {
-    await importPage.setValue(
-      'input[type="file"]',
-      path.resolve(experimentsFolder, args1)
-    );
-  }
-);
+When(/^user uploads Sample Submission "([^"]*)" file$/, async function (args1) {
+  await importPage.setValue(
+    'input[type="file"]',
+    path.resolve(experimentsFolder, args1)
+  );
+});
 
 Then(/^user can see "([^"]*)" preview table$/, async function (args1) {
   await importPage.assert.visible("#import-experiment div.b-table");
@@ -332,24 +330,37 @@ Then(/^user can see "([^"]*)" in preview table$/, async function (args1) {
   );
 });
 
-Then(/^user can see "([^"]*)" tab in Import Data page$/, async function(args1) {
-  switch (args1) {
-    case "Genotypic Data":
-      await importPage.assert.visible("@genotypicDataTab");
-      break;
-    default:
-      console.log("Unable to find " + args1);
-      break;
+Then(
+  /^user can see "([^"]*)" tab in Import Data page$/,
+  async function (args1) {
+    switch (args1) {
+      case "Genotypic Data":
+        await importPage.assert.visible("@genotypicDataTab");
+        break;
+      default:
+        console.log("Unable to find " + args1);
+        break;
+    }
   }
-
-});
-
-When('user sets {string} in Project Name field of import page', async function(s) {
-  await importPage.setValue("@projectNameField", s);
-})
+);
 
-Then('user can see {string} on preview table', async function(s) {
-  await importPage.assert.visible({selector:`//*[contains(text(), "${s}")]`, locateStrategy:"xpath"});
-})
+When(
+  "user sets {string} in Project Name field of import page",
+  async function (s) {
+    await importPage.setValue("@projectNameField", s);
+  }
+);
 
+Then("user can see {string} on preview table", async function (s) {
+  await importPage.assert.visible({
+    selector: `//*[contains(text(), "${s}")]`,
+    locateStrategy: "xpath",
+  });
+});
 
+When("user uploads Genotype Samples {string} file", async function (file) {
+  await importPage.setValue(
+    'input[type="file"]',
+    path.resolve(experimentsFolder, args1)
+  );
+});

src/step_definitions/sampleManagementSteps.js

@@ -0,0 +1,8 @@
+const { client } = require("nightwatch-api");
+const { Given, Then, When } = require("@cucumber/cucumber");
+const sampleManagementPage = client.page.sampleManagementPage();
+const page = client.page.page();
+
+Then("user can see Sample Management page", async function () {
+  await sampleManagementPage.assert.visible("@header");
+});