API authentication and security changes#635

Merged

alanbchristie merged 90 commits intostagingfrom m2ms-1247-b

Aug 27, 2024

Commits on Jun 25, 2024

style: Reorder functions in the module
Alan Christie
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refactor: Moved non-view functions to viewer.utils
Alan Christie
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fix: Removed unused save_pdb_zip and minor refactoring
Alan Christie
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feat: Removed circular import
Alan Christie
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feat: Fix get_open_targets (also get_open_proposals now not _private_)
Alan Christie
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feat: Fix get_open_proposals reference
Alan Christie
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refactor: ISpyB -> ISPyB
Alan Christie
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docs: Updated for use of mixins
Alan Christie
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Commits on Jun 26, 2024

feat: More API security migrations
Alan Christie
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feat: More security migrations
Alan Christie
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feat: Security migrations for hotspots and hypothesis
Alan Christie
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feat: More security fixes
Alan Christie
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Commits on Jun 27, 2024

feat: More security changes
Alan Christie
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feat: More security changes (and get_params -> get_img_from_smiles with default w/h)
Alan Christie
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Commits on Jun 28, 2024

fix: Attempt to fix calls to /xcdb/fragspect/ 500 errors
Alan Christie
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feat: Another attempot to fix ISPyB
Alan Christie
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feat: Use of new user_is_member_of_target()
Alan Christie
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Commits on Jul 3, 2024

feat: Experiment with validator
Alan Christie
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feat: Better serializer log
Alan Christie
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feat: Even more work on the serializer
Alan Christie
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feat: Minor error message tweak
Alan Christie
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Commits on Jul 4, 2024

feat: Add support for TEST_RESTRICTED_TAS_LIST (#614 )

alanbchristie
and
Alan Christie
authored
target permission validation mixin pattern implemented for Pose
kaliif
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Merge branch 'm2ms-1247-b-validate-mixin' into m2ms-1247-b
kaliif
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feat: Fix restricted logic
Alan Christie
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Commits on Jul 5, 2024

most endpoints secured with VaildateTargetMixin
kaliif
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Commits on Jul 8, 2024

fix: Removed unused endpoint
Alan Christie
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fix: secure SessionActions serializer
kaliif
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fix: Removed pset_download
Alan Christie
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fix: Design set upload now unsupported (404)
Alan Christie
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fix: Snapshots now open again
Alan Christie
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fix: CompoundIdentifierTypeView & TagCategoryView now read-only views
Alan Christie
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fix: Discourse POST now requires login
Alan Christie
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feat: User now needs to be a member of CSET target to download it
Alan Christie
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Commits on Jul 9, 2024

fix: secured TaskStatus endpoint
kaliif
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feat: Removal of unsed xcdb app
Alan Christie
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feat: Add log to use of dicttocsv
Alan Christie
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feat: More secure DictToCsv
Alan Christie
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feat: More consistent use of _ISPYB_SAFE_QUERY_SET
Alan Christie
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feat: Stricter UploadCSet class inheritance
Alan Christie
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feat: Fix isort issues
Alan Christie
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feat: Fix ListAPIView
Alan Christie
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feat: Remove references to xcdb
Alan Christie
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Commits on Jul 10, 2024

fix: secure UploadTaskView and ValidateTaskView
kaliif
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Merge branch 'm2ms-1247-securing-tasks' into m2ms-1247-b
kaliif
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Align 1247 with latest staging code (#616 )

alanbchristie
and
kaliif
authored
Align 1247 from staging (#619 )

alanbchristie
and
kaliif
authored
Align 1247 with latest staging (#620 )

alanbchristie
and
kaliif
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feat: Rstore CSetUpload post()
Alan Christie
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feat: Revert UploadCSet inheritance
Alan Christie
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fix: Another attempt to fix UploadCSet
Alan Christie
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fix: Another attmept to fix the view
Alan Christie
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fix: Anotehr attempt to get UploadCSet
Alan Christie
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feat: Fix UploadCSet view
Alan Christie
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feat: Fix JobRequest GET (restrict to members of the project)
Alan Christie
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Commits on Jul 11, 2024

feat: Enhanced logging for membership check failures
Alan Christie
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docs: Improve docs relating to security
Alan Christie
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docs: Minor typo
Alan Christie
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Commits on Jul 12, 2024

fix: Remove TEST_RESTRICTED_TAS_LIST feature
Alan Christie
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Align 1247 with staging (#621 )

alanbchristie
and
kaliif
authored
Align 1247 with latest staging (#623 )

alanbchristie
and
kaliif
authored
fix: Attempt to fix PoseView (now Pose)
Alan Christie
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fix: Attempt to debug Pose failure
Alan Christie
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fix: Another patch to Pose
Alan Christie
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fix: Fix log typo
Alan Christie
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fix: Attempt to fix permission on create
Alan Christie
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fix: Fix for ValidateTargetMixin?
Alan Christie
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fix: Better Mixin (renamed and copes with shortest filter string)
Alan Christie
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Commits on Jul 15, 2024

fix: Fix some project mixin views (includes some renaming)
Alan Christie
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refactor: View name consistency
Alan Christie
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fix: Fix for targetdownload mixin (and extra log)
Alan Christie
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fix: Better file handling
Alan Christie
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fix: Now serches ExpUpload for first matching record
Alan Christie
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fix: Better experiment download (use of only ExpUpload record)
Alan Christie
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fix: ExpDownload now inspects Project
Alan Christie
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fix: More naming consistency changes
Alan Christie
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fix: Attempt to fix 'ManyRelatedManager' is not iterable
Alan Christie
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fix: Use of correct download path
Alan Christie
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Align 1247 with staging (#624 )

alanbchristie
and
kaliif
authored

Commits on Jul 22, 2024

Align 1247 with staging (#627 )

alanbchristie
and
kaliif
authored
docs: Tweak messages
Alan Christie
committed
fix: Better file handling
Alan Christie
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docs: Doc tweak
Alan Christie
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Commits on Aug 1, 2024

Merge compound fix to 1247 (#628 )

authored

Commits on Aug 9, 2024

refactor: restrict_to_membership now restrict_pubic_to_membership
Alan Christie
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fix: ValidateProjectMixin does not insist on public proposal membership for GET
Alan Christie
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fix: Apply conflict from staging
Alan Christie
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Align 1247 with staging (#631 )

authored

Commits on Aug 16, 2024

fix: Fix project_id type (aligns with staging)
Alan Christie
committed
Align 1247 with staging (#633 )

authored