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Fix CI for T025 and T026 #234

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merged 3 commits into from
May 15, 2022
Merged

Fix CI for T025 and T026 #234

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eaaf6ab
T025: Skip nbval for KLIFS cells up to frozen KiSSim dataset
dominiquesydow May 15, 2022
708195e
T026: Skip nbval for KLIFS cells up to frozen dataset
dominiquesydow May 15, 2022
66c8f77
T025/6: Rerun notebooks with frozen datasets
dominiquesydow May 15, 2022
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8 changes: 4 additions & 4 deletions teachopencadd/talktorials/T025_kinase_similarity_kissim/data/kinase_distance_matrix.csv
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Original file line number Diff line number Diff line change
Expand Up @@ -3,8 +3,8 @@ BRAF,0.0,17.156338686753887,19.515299484883034,21.382787595771614,21.08916455286
CDK2,17.156338686753887,0.0,18.146634315220403,21.106349112675172,19.880466907012618,17.972924805354655,18.304287545534248,36.78007102947219,19.480656386198007
EGFR,19.515299484883034,18.146634315220403,0.0,16.391994226150114,17.28165001676286,16.467224894268252,17.498394567945827,36.04620732877459,22.12761688356271
ErbB2,21.382787595771614,21.106349112675172,16.391994226150114,0.0,23.850591780152264,23.88097026329463,22.563235671308735,41.277474125565234,24.68170843658602
KDR,21.089164552869708,19.880466907012618,17.28165001676286,23.850591780152264,0.0,19.25489849284598,20.430532117581084,41.104454960305326,20.26254051064599
LCK,21.582681844181142,17.972924805354655,16.467224894268252,23.88097026329463,19.25489849284598,0.0,19.221161302580736,39.02201780223324,22.45669271712331
MET,20.297483020671486,18.304287545534248,17.498394567945827,22.563235671308735,20.430532117581084,19.221161302580736,0.0,39.41427751663535,21.982654782895654
p110a,37.61086252438264,36.78007102947219,36.04620732877459,41.277474125565234,41.104454960305326,39.02201780223324,39.41427751663535,0.0,38.52974786964488
KDR,21.089164552869708,19.880466907012618,17.28165001676286,23.850591780152264,0.0,19.254898492846777,20.43053211758033,41.104454960305326,20.26254051064599
LCK,21.582681844181142,17.972924805354655,16.467224894268252,23.88097026329463,19.254898492846777,0.0,19.221161302580736,39.02201780223305,22.45669271712331
MET,20.297483020671486,18.304287545534248,17.498394567945827,22.563235671308735,20.43053211758033,19.221161302580736,0.0,39.41427751663535,21.982654782895654
p110a,37.61086252438264,36.78007102947219,36.04620732877459,41.277474125565234,41.104454960305326,39.02201780223305,39.41427751663535,0.0,38.52974786964488
p38a,21.73142143717456,19.480656386198007,22.127616883562684,24.68170843658602,20.26254051064599,22.45669271712331,21.982654782895654,38.52974786964488,0.0
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