Use nuopc labels in fv3cap. Refactor ModelAdvance in fv3cap

[DusanJovic-NOAA]

PR Checklist

• Ths PR is up-to-date with the top of all sub-component repositories except for those sub-components which are the subject of this PR. Please consult the ufs-weather-model wiki if you are unsure how to do this.

• This PR has been tested using a branch which is up-to-date with the top of all sub-component repositories except for those sub-components which are the subject of this PR

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Description

• Update fv3atm to use NUOPC semantic labels in fv3cap, and refactor ModelAdvance.
• Update NEMS. Removed NEMS grid component (no need to set PE_MEMBER01: in model_configure anymore)
• Cleanup CMakeLists.txt

Issue(s) addressed

Link the issues to be closed with this PR, whether in this repository, or in another repository.
(Remember, issues must always be created before starting work on a PR branch!)

• fixes #<issue_number>
• fixes noaa-emc/fv3atm/issues/<issue_number>

Testing

How were these changes tested? What compilers / HPCs was it tested with? Are the changes covered by regression tests? (If not, why? Do new tests need to be added?) Have regression tests and unit tests (utests) been run? On which platforms and with which compilers? (Note that unit tests can only be run on tier-1 platforms)

• hera.intel
• hera.gnu
• orion.intel
• cheyenne.intel
• cheyenne.gnu
• gaea.intel
• jet.intel
• wcoss_cray
• wcoss_dell_p3
• CI https://github.com/ufs-community/ufs-weather-model/actions/runs/1037618789

Dependencies

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Do PRs in upstream repositories need to be merged first?
If so add the "waiting for other repos" label and list the upstream PRs

• waiting on Remove nems grid comp NOAA-EMC/NEMS#104
• waiting on Use nuopc labels in fv3cap. Refactor ModelAdvance in fv3cap. NOAA-EMC/fv3atm#330

[DeniseWorthen]

Removes the requirement to have an empty data_table in the run directory. I've tested with control and 2 coupled configurations (one using data_override to apply runoff, one w/o) and all baselines pass.

diff --git a/module_fcst_grid_comp.F90 b/module_fcst_grid_comp.F90
index 618e86f..f9831b2 100644
--- a/module_fcst_grid_comp.F90
+++ b/module_fcst_grid_comp.F90
@@ -210,7 +210,7 @@ if (rc /= ESMF_SUCCESS) write(0,*) 'rc=',rc,__FILE__,__LINE__; if(ESMF_LogFoundE
     integer :: jsc, jec, isc, iec, nlev
     type(domain2D) :: domain
     integer :: n, fcstNpes, tmpvar
-    logical :: single_restart
+    logical :: single_restart, fexist
     integer, allocatable, dimension(:) :: isl, iel, jsl, jel
     integer, allocatable, dimension(:,:,:) :: deBlockList

@@ -404,9 +404,12 @@ if (rc /= ESMF_SUCCESS) write(0,*) 'rc=',rc,__FILE__,__LINE__; if(ESMF_LogFoundE
      call  atmos_model_init (atm_int_state%Atm,  atm_int_state%Time_init, &
                              atm_int_state%Time_atmos, atm_int_state%Time_step_atmos)
 !
-     call data_override_init ( ) ! Atm_domain_in  = Atm%domain, &
-                                 ! Ice_domain_in  = Ice%domain, &
-                                 ! Land_domain_in = Land%domain )
+     inquire(FILE='data_table', EXIST=fexist)
+     if (fexist) then
+       call data_override_init ( ) ! Atm_domain_in  = Atm%domain, &
+                                   ! Ice_domain_in  = Ice%domain, &
+                                   ! Land_domain_in = Land%domain )
+     endif

[aerorahul]

changes at the UFS level look good to me.
thanks for the cleanup

[BrianCurtis-NOAA]

Machine: gaea
Compiler: intel
Job: RT
Repo location: /lustre/f2/pdata/ncep/emc.nemspara/autort/pr/674640428/20210716091506/ufs-weather-model
Please make changes and add the following label back:
gaea-intel-RT

[climbfuji]

Nice cleanup work!

[climbfuji]

Looks like all tests passed. That was quick.

[junwang-noaa]

Notes: the control_atm_aerosols results changed due to ESMF remapping option synchronized (only allow setting with reproducibility requirement). Baseline results for all other tests do not change