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Add extended Schmidt gnomonic grid capability #125

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686bf7e
feature/regional_grid This commit references #66330.
GeorgeGayno-NOAA Aug 2, 2019
a0dbfd0
feature/regional_grid This commit references #66330.
GeorgeGayno-NOAA Aug 2, 2019
6b5b80b
feature/regional_grid This commit references #66330.
GeorgeGayno-NOAA Aug 2, 2019
62be830
feature/regional_grid This commit references #66330.
GeorgeGayno-NOAA Aug 2, 2019
6e0f4d8
feature/regional_grid This commit references #66330.
GeorgeGayno-NOAA Aug 6, 2019
ede685e
feature/regional_grid This commit references #66330.
GeorgeGayno-NOAA Aug 7, 2019
19ba383
Changes to JPgrid to generate grid indices in the same manner as GFDL…
JeffBeck-NOAA Aug 12, 2019
fed5e65
feature/regional_grid This commit references #66330.
GeorgeGayno-NOAA Aug 12, 2019
b01274b
feature/regional_grid: This commit references #66330.
GeorgeGayno-NOAA Aug 16, 2019
ca9000b
feature/regional_grid: This commit references #66330.
GeorgeGayno-NOAA Aug 19, 2019
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feature/regional_grid: This commit references #4.
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feature/regional_grid This commit references #4.
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feature/regional_grid This commit references #4.
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feature/regional_grid This commit references #4.
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feature/regional_grid This commit references #4.
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feature/regional_grid This commit references #4.
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feature/regional_grid This commit references #4.
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feature/regional_grid This commit references NOAA-EMC#4.
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feature/regional_grid This commit references NOAA-EMC#4.
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feature/regional_grid This commit references NOAA-EMC#4.
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feature/regional_grid This commit references NOAA-EMC#4
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feature/regional_grid This commit references NOAA-EMC#4
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feature/regional_grid This commit references NOAA-EMC#4
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feature/regional_grid This commit references NOAA-EMC#4
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feature/regional_grid This commit references NOAA-EMC#4
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feature/regional_grid This commit references NOAA-EMC#4
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feature/regional_grid This commit references NOAA-EMC#4.
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feature/regional_grid This commit references NOAA-EMC#4
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feature/regional_grid This commit references NOAA-EMC#4
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42 changes: 32 additions & 10 deletions driver_scripts/driver_grid.cray.sh
Original file line number Diff line number Diff line change
Expand Up @@ -33,19 +33,24 @@
# "uniform" - global uniform grid
# "stretch" - global stretched grid
# "nest" - global stretched grid with nest
# "regional" - stand-alone regional grid
# "regional_gfdl" - stand-alone gfdl regional grid
# "regional_esg" - stand-alone extended Schmidt gnomonic
# (esg) regional grid
# 3) For "stretch" and "nest" grids, set the stretching factor -
# "stretch_fac", and center lat/lon of highest resolution
# tile - "target_lat" and "target_lon".
# 4) For "nest" grids, set the refinement ratio - "refine_ratio",
# the starting/ending i/j index location within the parent
# tile - "istart_nest", "jstart_nest", "iend_nest", "jend_nest"
# 5) For "regional" grids, set the "halo". Default is three
# 5) For "regional_gfdl" grids, set the "halo". Default is three
# rows/columns.
# 6) Set working directory - TMPDIR - and path to the repository
# 6) For "regional_esg" grids, set center lat/lon of grid,
# - "target_lat/lon" - the i/j dimensions - "i/jdim", the
# x/y grid spacing - "delx/y", and halo.
# 7) Set working directory - TMPDIR - and path to the repository
# clone - home_dir.
# 7) Submit script: "cat $script | bsub".
# 8) All files will be placed in "out_dir".
# 8) Submit script: "cat $script | bsub".
# 9) All files will be placed in "out_dir".
#
#-----------------------------------------------------------------------

Expand All @@ -57,14 +62,18 @@ module list
# Set grid specs here.
#-----------------------------------------------------------------------

export res=96
export gtype=regional # 'uniform', 'stretch', 'nest', or 'regional'
export gtype=uniform # 'uniform', 'stretch', 'nest'
# 'regional_gfdl', 'regional_esg'

if [ $gtype = stretch ]; then
if [ $gtype = uniform ]; then
export res=96
elif [ $gtype = stretch ]; then
export res=96
export stretch_fac=1.5 # Stretching factor for the grid
export target_lon=-97.5 # Center longitude of the highest resolution tile
export target_lat=35.5 # Center latitude of the highest resolution tile
elif [ $gtype = nest ] || [ $gtype = regional ]; then
elif [ $gtype = nest ] || [ $gtype = regional_gfdl ]; then
export res=96
export stretch_fac=1.5 # Stretching factor for the grid
export target_lon=-97.5 # Center longitude of the highest resolution tile
export target_lat=35.5 # Center latitude of the highest resolution tile
Expand All @@ -74,6 +83,19 @@ elif [ $gtype = nest ] || [ $gtype = regional ]; then
export iend_nest=166 # Ending i-direction index of nest grid in parent tile supergrid
export jend_nest=164 # Ending j-direction index of nest grid in parent tile supergrid
export halo=3
elif [ $gtype = regional_esg ] ; then
export res=-999 # equivalent res is computed.
export target_lon=-97.5 # Center longitude of grid
export target_lat=35.5 # Center latitude of grid
export idim=301 # Dimension of grid in 'i' direction
export jdim=200 # Dimension of grid in 'j' direction
export delx=0.0585 # Grid spacing (in degrees) in the 'i' direction
# on the SUPERGRID (which has twice the resolution of
# the model grid). The physical grid spacing in the 'i'
# direction is related to delx as follows:
# distance = 2*delx*(circumf_Earth/360 deg)
export dely=0.0585 # Grid spacing (in degrees) in the 'j' direction.
export halo=3 # number of row/cols for halo
fi

#-----------------------------------------------------------------------
Expand All @@ -85,7 +107,7 @@ fi

export home_dir=$LS_SUBCWD/..
export TMPDIR=/gpfs/hps3/stmp/$LOGNAME/fv3_grid.$gtype
export out_dir=/gpfs/hps3/stmp/$LOGNAME/C${res}
export out_dir=/gpfs/hps3/stmp/$LOGNAME/my_grids

export NODES=1
export APRUN="aprun -n 1 -N 1 -j 1 -d 1 -cc depth"
Expand Down
42 changes: 32 additions & 10 deletions driver_scripts/driver_grid.dell.sh
Original file line number Diff line number Diff line change
Expand Up @@ -35,19 +35,24 @@
# "uniform" - global uniform grid
# "stretch" - global stretched grid
# "nest" - global stretched grid with nest
# "regional" - stand-alone regional grid
# "regional_gfdl" - stand-alone gfdl regional grid
# "regional_esg" - stand-alone extended Schmidt gnomonic
# (esg) regional grid
# 3) For "stretch" and "nest" grids, set the stretching factor -
# "stretch_fac", and center lat/lon of highest resolution
# tile - "target_lat" and "target_lon".
# 4) For "nest" grids, set the refinement ratio - "refine_ratio",
# the starting/ending i/j index location within the parent
# tile - "istart_nest", "jstart_nest", "iend_nest", "jend_nest"
# 5) For "regional" grids, set the "halo". Default is three
# 5) For "regional_gfdl" grids, set the "halo". Default is three
# rows/columns.
# 6) Set working directory - TMPDIR - and path to the repository
# 6) For "regional_esg" grids, set center lat/lon of grid,
# - "target_lat/lon" - the i/j dimensions - "i/jdim", the
# x/y grid spacing - "delx/y", and halo.
# 7) Set working directory - TMPDIR - and path to the repository
# clone - home_dir.
# 7) Submit script: "cat $script | bsub".
# 8) All files will be placed in "out_dir".
# 8) Submit script: "cat $script | bsub".
# 9) All files will be placed in "out_dir".
#
#-----------------------------------------------------------------------

Expand All @@ -59,14 +64,18 @@ module list
# Set grid specs here.
#-----------------------------------------------------------------------

export res=96
export gtype=regional # 'uniform', 'stretch', 'nest', or 'regional'
export gtype=uniform # 'uniform', 'stretch', 'nest',
# 'regional_gfdl', 'regional_esg'

if [ $gtype = stretch ]; then
if [ $gtype = uniform ]; then
export res=96
elif [ $gtype = stretch ]; then
export res=96
export stretch_fac=1.5 # Stretching factor for the grid
export target_lon=-97.5 # Center longitude of the highest resolution tile
export target_lat=35.5 # Center latitude of the highest resolution tile
elif [ $gtype = nest ] || [ $gtype = regional ]; then
elif [ $gtype = nest ] || [ $gtype = regional_gfdl ]; then
export res=96
export stretch_fac=1.5 # Stretching factor for the grid
export target_lon=-97.5 # Center longitude of the highest resolution tile
export target_lat=35.5 # Center latitude of the highest resolution tile
Expand All @@ -76,6 +85,19 @@ elif [ $gtype = nest ] || [ $gtype = regional ]; then
export iend_nest=166 # Ending i-direction index of nest grid in parent tile supergrid
export jend_nest=164 # Ending j-direction index of nest grid in parent tile supergrid
export halo=3
elif [ $gtype = regional_esg ] ; then
export res=-999 # equivalent res is computed.
export target_lon=-97.5 # Center longitude of grid
export target_lat=35.5 # Center latitude of grid
export idim=301 # Dimension of grid in 'i' direction
export jdim=200 # Dimension of grid in 'j' direction
export delx=0.0585 # Grid spacing (in degrees) in the 'i' direction
# on the SUPERGRID (which has twice the resolution of
# the model grid). The physical grid spacing in the 'i'
# direction is related to delx as follows:
# distance = 2*delx*(circumf_Earth/360 deg)
export dely=0.0585 # Grid spacing (in degrees) in the 'j' direction.
export halo=3 # number of row/cols for halo
fi

#-----------------------------------------------------------------------
Expand All @@ -87,7 +109,7 @@ fi

export home_dir=$LS_SUBCWD/..
export TMPDIR=/gpfs/dell1/stmp/$LOGNAME/fv3_grid.$gtype
export out_dir=/gpfs/dell1/stmp/$LOGNAME/C${res}
export out_dir=/gpfs/dell1/stmp/$LOGNAME/my_grids

#-----------------------------------------------------------------------
# Should not need to change anything below here.
Expand Down
42 changes: 32 additions & 10 deletions driver_scripts/driver_grid.hera.sh
Original file line number Diff line number Diff line change
Expand Up @@ -33,19 +33,24 @@
# "uniform" - global uniform grid
# "stretch" - global stretched grid
# "nest" - global stretched grid with nest
# "regional" - stand-alone regional grid
# "regional_gfdl" - stand-alone gfdl regional grid
# "regional_esg" - stand-alone extended Schmidt gnomonic
# (esg) regional grid
# 3) For "stretch" and "nest" grids, set the stretching factor -
# "stretch_fac", and center lat/lon of highest resolution
# tile - "target_lat" and "target_lon".
# 4) For "nest" grids, set the refinement ratio - "refine_ratio",
# the starting/ending i/j index location within the parent
# tile - "istart_nest", "jstart_nest", "iend_nest", "jend_nest"
# 5) For "regional" grids, set the "halo". Default is three
# 5) For "regional_gfdl" grids, set the "halo". Default is three
# rows/columns.
# 6) Set working directory - TMPDIR - and path to the repository
# 6) For "regional_esg" grids, set center lat/lon of grid,
# - "target_lat/lon" - the i/j dimensions - "i/jdim", the
# x/y grid spacing - "delx/y", and halo.
# 7) Set working directory - TMPDIR - and path to the repository
# clone - home_dir.
# 7) Submit script: "sbatch $script".
# 8) All files will be placed in "out_dir".
# 8) Submit script: "sbatch $script".
# 9) All files will be placed in "out_dir".
#
#-----------------------------------------------------------------------

Expand All @@ -59,14 +64,18 @@ module list
# Set grid specs here.
#-----------------------------------------------------------------------

export res=96
export gtype=uniform # 'uniform', 'stretch', 'nest', or 'regional'
export gtype=uniform # 'uniform', 'stretch', 'nest'
# 'regional_gfdl', 'regional_esg'

if [ $gtype = stretch ]; then
if [ $gtype = uniform ]; then
export res=96
elif [ $gtype = stretch ]; then
export res=96
export stretch_fac=1.5 # Stretching factor for the grid
export target_lon=-97.5 # Center longitude of the highest resolution tile
export target_lat=35.5 # Center latitude of the highest resolution tile
elif [ $gtype = nest ] || [ $gtype = regional ]; then
elif [ $gtype = nest ] || [ $gtype = regional_gfdl ]; then
export res=96
export stretch_fac=1.5 # Stretching factor for the grid
export target_lon=-97.5 # Center longitude of the highest resolution tile
export target_lat=35.5 # Center latitude of the highest resolution tile
Expand All @@ -76,6 +85,19 @@ elif [ $gtype = nest ] || [ $gtype = regional ]; then
export iend_nest=166 # Ending i-direction index of nest grid in parent tile supergrid
export jend_nest=164 # Ending j-direction index of nest grid in parent tile supergrid
export halo=3 # Lateral boundary halo
elif [ $gtype = regional_esg ] ; then
export res=-999 # equivalent res is computed.
export target_lon=-97.5 # Center longitude of grid
export target_lat=35.5 # Center latitude of grid
export idim=301 # Dimension of grid in 'i' direction
export jdim=200 # Dimension of grid in 'j' direction
export delx=0.0585 # Grid spacing (in degrees) in the 'i' direction
# on the SUPERGRID (which has twice the resolution of
# the model grid). The physical grid spacing in the 'i'
# direction is related to delx as follows:
# distance = 2*delx*(circumf_Earth/360 deg)
export dely=0.0585 # Grid spacing (in degrees) in the 'j' direction.
export halo=3 # number of row/cols for halo
fi

#-----------------------------------------------------------------------
Expand All @@ -87,7 +109,7 @@ fi

export home_dir=$SLURM_SUBMIT_DIR/..
export TMPDIR=/scratch2/NCEPDEV/stmp1/$LOGNAME/fv3_grid.$gtype
export out_dir=/scratch2/NCEPDEV/stmp1/$LOGNAME/C${res}
export out_dir=/scratch2/NCEPDEV/stmp1/$LOGNAME/my_grids

#-----------------------------------------------------------------------
# Should not need to change anything below here.
Expand Down
46 changes: 34 additions & 12 deletions driver_scripts/driver_grid.jet.sh
Original file line number Diff line number Diff line change
@@ -1,13 +1,13 @@
#!/bin/bash

#SBATCH -J fv3_grid_driver
#SBATCH -A emcda
#SBATCH -A hfv3gfs
#SBATCH --open-mode=truncate
#SBATCH -o log.fv3_grid_driver
#SBATCH -e log.fv3_grid_driver
#SBATCH --nodes=1 --ntasks-per-node=24
#SBATCH --partition=xjet
#SBATCH -q windfall
#SBATCH -q batch
#SBATCH -t 00:10:00

#-----------------------------------------------------------------------
Expand All @@ -34,19 +34,24 @@
# "uniform" - global uniform grid
# "stretch" - global stretched grid
# "nest" - global stretched grid with nest
# "regional" - stand-alone regional grid
# "regional_gfdl" - stand-alone gfdl regional grid
# "regional_esg" - stand-alone extended Schmidt gnomonic
# (esg) regional grid
# 3) For "stretch" and "nest" grids, set the stretching factor -
# "stretch_fac", and center lat/lon of highest resolution
# tile - "target_lat" and "target_lon".
# 4) For "nest" grids, set the refinement ratio - "refine_ratio",
# the starting/ending i/j index location within the parent
# tile - "istart_nest", "jstart_nest", "iend_nest", "jend_nest"
# 5) For "regional" grids, set the "halo". Default is three
# 5) For "regional_gfdl" grids, set the "halo". Default is three
# rows/columns.
# 6) Set working directory - TMPDIR - and path to the repository
# 6) For "regional_esg" grids, set center lat/lon of grid,
# - "target_lat/lon" - the i/j dimensions - "i/jdim", the
# x/y grid spacing - "delx/y", and halo.
# 7) Set working directory - TMPDIR - and path to the repository
# clone - home_dir.
# 7) Submit script: "sbatch $script".
# 8) All files will be placed in "out_dir".
# 8) Submit script: "sbatch $script".
# 9) All files will be placed in "out_dir".
#
#-----------------------------------------------------------------------

Expand All @@ -60,14 +65,18 @@ module list
# Set grid specs here.
#-----------------------------------------------------------------------

export res=96
export gtype=regional # 'uniform', 'stretch', 'nest', or 'regional'
export gtype=uniform # 'uniform', 'stretch', 'nest'
# 'regional_gfdl', 'regional_esg'

if [ $gtype = stretch ]; then
if [ $gtype = uniform ]; then
export res=96
elif [ $gtype = stretch ]; then
export res=96
export stretch_fac=1.5 # Stretching factor for the grid
export target_lon=-97.5 # Center longitude of the highest resolution tile
export target_lat=35.5 # Center latitude of the highest resolution tile
elif [ $gtype = nest ] || [ $gtype = regional ]; then
elif [ $gtype = nest ] || [ $gtype = regional_gfdl ]; then
export res=96
export stretch_fac=1.5 # Stretching factor for the grid
export target_lon=-97.5 # Center longitude of the highest resolution tile
export target_lat=35.5 # Center latitude of the highest resolution tile
Expand All @@ -77,6 +86,19 @@ elif [ $gtype = nest ] || [ $gtype = regional ]; then
export iend_nest=166 # Ending i-direction index of nest grid in parent tile supergrid
export jend_nest=164 # Ending j-direction index of nest grid in parent tile supergrid
export halo=3 # Lateral boundary halo
elif [ $gtype = regional_esg ] ; then
export res=-999 # equivalent resolution is computed
export target_lon=-97.5 # Center longitude of grid
export target_lat=35.5 # Center latitude of grid
export idim=301 # Dimension of grid in 'i' direction
export jdim=200 # Dimension of grid in 'j' direction
export delx=0.0585 # Grid spacing (in degrees) in the 'i' direction
# on the SUPERGRID (which has twice the resolution of
# the model grid). The physical grid spacing in the 'i'
# direction is related to delx as follows:
# distance = 2*delx*(circumf_Earth/360 deg)
export dely=0.0585 # Grid spacing (in degrees) in the 'j' direction.
export halo=3 # number of row/cols for halo
fi

#-----------------------------------------------------------------------
Expand All @@ -88,7 +110,7 @@ fi

export home_dir=$SLURM_SUBMIT_DIR/..
export TMPDIR=/lfs4/HFIP/emcda/$LOGNAME/stmp/fv3_grid.$gtype
export out_dir=/lfs4/HFIP/emcda/$LOGNAME/stmp/C${res}
export out_dir=/lfs4/HFIP/emcda/$LOGNAME/stmp/my_grids

#-----------------------------------------------------------------------
# Should not need to change anything below here.
Expand Down
2 changes: 1 addition & 1 deletion reg_tests/grid_gen/c96.uniform.sh
Original file line number Diff line number Diff line change
Expand Up @@ -35,7 +35,7 @@ echo "Ending at: " `date`
# Compare output to baseline set of data.
#-----------------------------------------------------------------------------

cd $out_dir
cd $out_dir/C96

test_failed=0
for files in *tile*.nc ./fix_sfc/*tile*.nc
Expand Down
9 changes: 5 additions & 4 deletions reg_tests/grid_gen/driver.cray.sh
Original file line number Diff line number Diff line change
Expand Up @@ -44,6 +44,7 @@ export machine=WCOSS_C
export KMP_AFFINITY=disabled
export NCCMP=/gpfs/hps3/emc/global/noscrub/George.Gayno/util/netcdf/nccmp
export HOMEreg=/gpfs/hps3/emc/global/noscrub/George.Gayno/ufs_utils.git/reg_tests/grid_gen/baseline_data
export NCDUMP=/gpfs/hps/usrx/local/prod/NetCDF/4.2/intel/sandybridge/bin/ncdump

rm -fr $WORK_DIR

Expand All @@ -58,16 +59,16 @@ bsub -e $LOG_FILE -o $LOG_FILE -q $QUEUE -P $PROJECT_CODE -J c96.uniform -W 0:15
-extsched 'CRAYLINUX[]' "export NODES=1; $PWD/c96.uniform.sh"

#-----------------------------------------------------------------------------
# C96 regional grid
# gfdl regional grid
#-----------------------------------------------------------------------------

bsub -e $LOG_FILE -o $LOG_FILE -q $QUEUE -P $PROJECT_CODE -J c96.regional -W 0:10 -M 2400 \
-w 'ended(c96.uniform)' -extsched 'CRAYLINUX[]' "export NODES=1; $PWD/c96.regional.sh"
bsub -e $LOG_FILE -o $LOG_FILE -q $QUEUE -P $PROJECT_CODE -J gfdl.regional -W 0:10 -M 2400 \
-w 'ended(c96.uniform)' -extsched 'CRAYLINUX[]' "export NODES=1; $PWD/gfdl.regional.sh"

#-----------------------------------------------------------------------------
# Create summary log.
#-----------------------------------------------------------------------------

bsub -o $LOG_FILE -q $QUEUE -P $PROJECT_CODE -J summary -R "rusage[mem=100]" -W 0:01 -w 'ended(c96.regional)' "grep -a '<<<' $LOG_FILE >> $SUM_FILE"
bsub -o $LOG_FILE -q $QUEUE -P $PROJECT_CODE -J summary -R "rusage[mem=100]" -W 0:01 -w 'ended(gfdl.regional)' "grep -a '<<<' $LOG_FILE >> $SUM_FILE"

exit
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