Toolkit for VNTR genotyping and repeat-pan genome graph construction
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Updated
Mar 7, 2025 - Python
Toolkit for VNTR genotyping and repeat-pan genome graph construction
A python library for decomposing and visualizing tandem repeat sequences
MucOneUp simulates diploid MUC1 VNTR references with variable repeats, targeted mutations, and toxic protein detection. It also integrates an Illumina read simulation pipeline for comprehensive genomic benchmarking.
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