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rnaseq

Here are 5 public repositories matching this topic...

COMBINE-lab / salmon

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

c-plus-plus bioinformatics rna-seq gene-expression rnaseq scrna-seq quantification transcriptome single-cell quasi-mapping salmon sailfish 10x single-cell-rna-seq selective-alignment rna-seq-quantification

Updated May 29, 2024
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rnaseqc

getzlab / rnaseqc

Fast, efficient RNA-Seq metrics for quality control and process optimization

bioinformatics rna-seq rnaseq

Updated Nov 2, 2024
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chanzuckerberg / ExpressionMatrix2

Software for exploration of gene expression data from single-cell RNA sequencing.

clustering rnaseq locality-sensitive-hashing single-cell

Updated Jun 20, 2019
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pentalpha / luthien

Super ultra-fast fastq preprocessor, using parallel windowed adaptive trimming.

bioinformatics rna-seq parallel parallel-computing parallelism concurrent-programming rnaseq trimming fastq parallel-programming fastq-files bioinfo quality-score fastq-processing

Updated Oct 28, 2019
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Tools-jusuE404 / bam2tcc

rnaseq kallisto

Updated Oct 15, 2018
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