Sequence-based prediction of peptide-TCR interactions using paired chain data
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Mar 27, 2024 - Python
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epitopes
Here are 9 public repositories matching this topic...
Code for the DiscoTope-3.0 paper and model
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Jun 6, 2024 - Python
A tool for downloading HLA alleles, epitopes and frequencies
python frequency parser command-line download dna alignment mhc hla python-module allele-frequencies alleles multiple-sequence-alignment epitope epitopes
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Jul 21, 2023 - Python
Prediction of Conformational B-cell epitopes in an antigen for human host
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Dec 12, 2024 - Python
Implementation of the Analytic Hierarchy Process (AHP) to obtain the immunogenicity score of wheat lines based on their celiac disease (CD) epitopes matches on alpha- and gamma-gliadins amplicons by NGS and the score for oligopeptides based on an IFN-g ELISpot assays with fresh peripherical blood mononuclear cells (PBMCs).
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Feb 22, 2023 - Python
BMEB Thesis project which develops ssDNA aptamer sequences from probabilistic data per provided protein epitope.
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Jun 27, 2023 - Python
Processing of proteomic files for prolamin peptides analysis and CD epitopes search for each protein fraction.
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Sep 14, 2022 - Python
This is a project to contribute utilities for ViruSurf, a viral db centered in viral sequences.
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Sep 30, 2020 - Python
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