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deseq2-analysis

Here are 15 public repositories matching this topic...

tacazares / SeedMatchR

Off-target analysis of siRNA knock down paired with RNAseq

rna-seq transcriptomics mirna sirna deseq2-analysis

Updated Mar 14, 2024
R

conorheffron / gene-expr

Breast Cancer Dataset Analysis

ggplot2 dplyr health report r-programming deseq2-analysis

Updated Jul 25, 2024
R

sivkri / miRNASeq-DE-Analysis-QC

Performing RNA-Seq data analysis and quality control using DESeq2 in R.

visualization quality-control rna-seq deseq2 rna-seq-analysis rna-seq-data rna-seq-pipeline differential-expression-analysis deseq2-analysis

Updated Jun 9, 2023
R

Hemangini09 / RNA-seq-data-analysis-with-DESeq2

Performing RNA-seq data analysis with DESeq2 package of bioconductor

tcga rna-seq-data degs deseq2-analysis

Updated Feb 27, 2023
R

glyspy / RNA-seq-analysis

RNA-seq replication analysis.

bash rnaseq-pipeline deseq2-analysis r-programming-language

Updated May 24, 2024
R

MeghanaDutta / DeSeq2_workflow

DESeq2 Analysis of Human Airway Smooth Muscle Cells

dplyr tidyverse volcano-plot deseq2-analysis ma-plot

Updated Jul 30, 2023
R

Tec-BASE-Laboratory / DGE-Analysis

Differential Gene Expression (DGE) Analysis with DESeq2 using a reference genome

deseq2-analysis

Updated Feb 25, 2023
R

kevincjnixon / autoDE

Automated DE analysis by DESeq2

rna-seq deseq2 rna-seq-analysis rna-seq-pipeline deseq2-analysis

Updated Aug 19, 2021
R

MeenaEaswaran / BMI-5311-Foundations-of-Biomedical-Information-Sciences-II

This repository includes scripts, data, and documentation for analyzing Bulk RNA-seq data from NCBI GEO, supporting journal paper preparation in alignment with course requirements.

cytoscape differential-expression ncbi-geo bulk-rna-seq grein stringdb deseq2-analysis metascape hub-genes immune-cell-ai

Updated Jan 7, 2025
R

meeranhussain / RNASeq_Deseq2_Snakemake

Differential gene expression analysis for samples with replicates using STAR-DeSeq2 pipeline

rna rna-seq-analysis differential-gene-expression rna-seq-pipeline snakemake-workflow deseq2-analysis star-aligner

Updated Apr 6, 2024
R

okrawczyk / DESeq2_analysis

Basic script for RNA-seq analysis with DESeq2

rna-seq deseq2 rna-seq-analysis deseq2-analysis

Updated Dec 13, 2020
R

ziul-bio / Rna-Seq_Workflow

Neste projeto descrevo diferentes parâmetros e opções para a execução de programas necessários à análise de Rna-Seq, além de incluir informações e opniões que possam facilitar a escolha da melhor opção que se adque à análise em questão.

bioinformatics rna-seq r-markdown rna-seq-analysis r-programming rna-seq-pipeline deseq2-analysis

Updated Jan 12, 2022
R

aGalhoz / Multi-Omics-PD

Bioinformatic differential expression analyses pipeline to investigate biomarkers in Parkinson disease.

transcriptomics parkinson-disease smallrna-seq differential-expression-analyses r-software deseq2-analysis

Updated May 12, 2022
R

MendenLab / DEx_StemCells_new

Ferroptosis and antioxidant effect on stem cells

stem-cell-differentiation antioxidants time-dependent volcano-plot differential-expression-analyses r-software deseq2-analysis ferroptosis

Updated Nov 2, 2022
R

ShwetaNagre / RNA_Seq_Workflow

Normalizing RNA-Seq Data

rna-seq next-generation-sequencing r-programming normalization differential-gene-expression bulk-rna-seq deseq2-analysis

Updated Oct 7, 2024
R

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