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Fix Connectivity Graph (V1) #152

Fix Connectivity Graph (V1)

Fix Connectivity Graph (V1) #152

Triggered via pull request April 30, 2024 15:04
Status Failure
Total duration 2m 31s
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tests.yml

on: pull_request
Run python unit tests in docker
1m 52s
Run python unit tests in docker
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1 error and 13 warnings
Run python unit tests in docker
Process completed with exit code 2.
lint
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
lint
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
docs: docs/command_line_interface.rst#L15
Failed to import "get_parser" from "bayestme.cli.load_spaceranger".
docs: docs/command_line_interface.rst#L36
Failed to import "get_parser" from "bayestme.cli.bleeding_correction".
docs: docs/command_line_interface.rst#L45
Failed to import "get_parser" from "bayestme.cli.phenotype_selection".
docs: docs/command_line_interface.rst#L50
Explicit markup ends without a blank line; unexpected unindent.
docs: docs/command_line_interface.rst#L53
Failed to import "get_parser" from "bayestme.cli.deconvolve".
docs: docs/command_line_interface.rst#L71
Failed to import "get_parser" from "bayestme.cli.spatial_expression".
docs: docs/command_line_interface.rst#L85
Failed to import "get_parser" from "bayestme.cli.plot_bleeding_correction".
docs: docs/command_line_interface.rst#L94
Failed to import "get_parser" from "bayestme.cli.plot_deconvolution".
docs: docs/command_line_interface.rst#L103
Failed to import "get_parser" from "bayestme.cli.plot_spatial_expression".
docs: docs/data_format.rst#L68
Bullet list ends without a blank line; unexpected unindent.
Run python unit tests in docker
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.