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Hydroxy proline diagnostic ion error #2324

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merged 15 commits into from
Dec 12, 2023
Merged

Hydroxy proline diagnostic ion error #2324

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1aeb4a8
reverted filtering method for psms passed to FlashLFQ
Alexander-Sol Feb 28, 2023
1312c5d
Merge branch 'Alexander-Sol-FilteringHotfix'
Mar 10, 2023
1230534
Merge remote-tracking branch 'upstream/master'
Mar 15, 2023
58a2e8a
Merge remote-tracking branch 'upstream/master'
Mar 23, 2023
9339535
Merge remote-tracking branch 'upstream/master'
trishorts Mar 28, 2023
c967b61
Merge branch 'master' of https://github.com/trishorts/MetaMorpheus
trishorts Mar 28, 2023
c624070
Merge remote-tracking branch 'upstream/master'
trishorts Jul 10, 2023
3682d10
Merge remote-tracking branch 'upstream/master'
trishorts Aug 3, 2023
32763af
Merge remote-tracking branch 'upstream/master'
trishorts Aug 14, 2023
bd18b72
Merge remote-tracking branch 'upstream/master'
trishorts Oct 17, 2023
b6b921f
Merge remote-tracking branch 'upstream/master'
trishorts Nov 28, 2023
057436e
update diagnostic ion mass for hydroxyproline
trishorts Dec 11, 2023
5a5db86
Merge branch 'master' into hydroxyProlineDiagnosticIonError
trishorts Dec 11, 2023
6b5600f
wrong mass of course
trishorts Dec 11, 2023
33f84fd
Merge branch 'hydroxyProlineDiagnosticIonError' of https://github.com…
trishorts Dec 12, 2023
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2 changes: 1 addition & 1 deletion MetaMorpheus/EngineLayer/Mods/Mods.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -114,7 +114,7 @@ TG P
PP Anywhere.
MT Common Biological
CF O1
DI HCD:170.060123533
DI HCD:170.07642
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In the comment, you said that the mass was updated to 176.0764. not 170.07642.

In the blog post, Ben Orsburn said that he pulled an XIC for 176.076, but then he shows a spectra where an ion at 171.0766 is highlighted.

Are the diagnostic ions recorded as masses and then converted to mz downstream? I'm a little confused as to what's going on.

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wrong mass in comment. also correct now. forgot to push yesterday before i left. these are mzs so no conversion.

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image

DR Unimod; 35.
//
ID Nitrosylation
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