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quick fix file loading done (#2064)
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* Try to update mzLib 466 to 471

* Add ReadSpectralLibrary_pDeep

* DoneWithFile

* Delete yeast2fake_pdeep_lib.msp

Co-authored-by: Robert Millikin <rmillikin@wisc.edu>
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lonelu and rmillikin authored Jun 28, 2021
1 parent 4944681 commit 2600c70
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Showing 2 changed files with 3 additions and 1 deletion.
2 changes: 2 additions & 0 deletions TaskLayer/GlycoSearchTask/GlycoSearchTask.cs
Original file line number Diff line number Diff line change
Expand Up @@ -99,6 +99,8 @@ protected override MyTaskResults RunSpecific(string OutputFolder, List<DbForTask
Status("Getting ms2 scans...", thisId);

Ms2ScanWithSpecificMass[] arrayOfMs2ScansSortedByMass = GetMs2Scans(myMsDataFile, origDataFile, combinedParams).OrderBy(b => b.PrecursorMass).ToArray();
myFileManager.DoneWithFile(origDataFile);

List<GlycoSpectralMatch>[] newCsmsPerMS2ScanPerFile = new List<GlycoSpectralMatch>[arrayOfMs2ScansSortedByMass.Length];

for (int currentPartition = 0; currentPartition < CommonParameters.TotalPartitions; currentPartition++)
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2 changes: 1 addition & 1 deletion TaskLayer/XLSearchTask/XLSearchTask.cs
Original file line number Diff line number Diff line change
Expand Up @@ -95,7 +95,7 @@ protected override MyTaskResults RunSpecific(string OutputFolder, List<DbForTask
Status("Getting ms2 scans...", thisId);

Ms2ScanWithSpecificMass[] arrayOfMs2ScansSortedByMass = GetMs2Scans(myMsDataFile, origDataFile, combinedParams).OrderBy(b => b.PrecursorMass).ToArray();

myFileManager.DoneWithFile(origDataFile);
List<CrosslinkSpectralMatch>[] newCsmsPerMS2ScanPerFile = new List<CrosslinkSpectralMatch>[arrayOfMs2ScansSortedByMass.Length];
for (int currentPartition = 0; currentPartition < CommonParameters.TotalPartitions; currentPartition++)
{
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