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SH: #263

Workflow file for this run

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v3
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
# mikl >
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck any::remotes any::reticulate
needs: check
# https://rstudio.github.io/reticulate/articles/package.html#using-github-actions
- uses: actions/setup-python@v4
with:
python-version: "3.x"
- name: setup r-reticulate venv
shell: Rscript {0}
run: |
# doBy Github:
remotes::install_github('hojsgaard/doby')
# reticulate
python_packages <- c("numpy", "sympy")
library(reticulate)
virtualenv_create("r-reticulate", Sys.which("python"))
virtualenv_install("r-reticulate", python_packages)
path_to_python <- virtualenv_python("r-reticulate")
writeLines(sprintf("RETICULATE_PYTHON=%s", path_to_python),
Sys.getenv("GITHUB_ENV"))
# < mikl
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
# pkgdown:
# runs-on: ubuntu-latest
# # Only restrict concurrency for non-PR jobs
# concurrency:
# group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
# env:
# GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
# steps:
# - uses: actions/checkout@v3
#
# - uses: r-lib/actions/setup-pandoc@v2
#
# - uses: r-lib/actions/setup-r@v2
# with:
# use-public-rspm: true
#
# # mikl >
# - uses: r-lib/actions/setup-r-dependencies@v2
# with:
# extra-packages: any::pkgdown any::remotes any::reticulate, local::.
# needs: website
#
# # https://rstudio.github.io/reticulate/articles/package.html#using-github-actions
# - uses: actions/setup-python@v4
# with:
# python-version: "3.x"
#
# - name: setup r-reticulate venv
# shell: Rscript {0}
# run: |
# # doBy Github:
# remotes::install_github('hojsgaard/doby')
#
# # reticulate
# python_packages <- c("numpy", "sympy")
#
# library(reticulate)
# virtualenv_create("r-reticulate", Sys.which("python"))
# virtualenv_install("r-reticulate", python_packages)
#
# path_to_python <- virtualenv_python("r-reticulate")
# writeLines(sprintf("RETICULATE_PYTHON=%s", path_to_python),
# Sys.getenv("GITHUB_ENV"))
# # < mikl
#
# - name: Build site
# run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
# shell: Rscript {0}
#
# - name: Deploy to GitHub pages 🚀
# if: github.event_name != 'pull_request'
# uses: JamesIves/github-pages-deploy-action@v4.4.1
# with:
# clean: false
# branch: gh-pages
# folder: docs