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This package runs collective molecular dynamics simulations, where collective motions from anisotropic network model normal mode analysis drive all-atom dynamics through targeted molecular dynamics simulations and energy minimization

prody.csb.pitt.edu/comd/

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This package runs collective molecular dynamics simulations, where collective motions from anisotropic network model normal mode analysis drive all-atom dynamics through targeted molecular dynamics simulations and energy minimization

prody.csb.pitt.edu/comd/

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simulations pathway-analysis sampling-methods anm comd

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