Repositories list

• squonk2-openapi-js-client-generator

  Public
  TypeScript client generator for OpenAPI files. GitHub Action to generate, build & publish a client with docs!

  JavaScript

  •

  MIT License

  •0•1•6•12•Updated Mar 25, 2025Mar 25, 2025

• eslint-config-squonk

  Public
  ESLint config used by Squonk front-end apps

  JavaScript

  •

  MIT License

  •0•0•1•10•Updated Mar 25, 2025Mar 25, 2025

• squonk2-data-manager-ui

  Public
  Web UI for the Squonk Data Manager

  squonk2

  TypeScript

  •

  Apache License 2.0

  •1•2•39•21•Updated Mar 24, 2025Mar 24, 2025

• fragmentor

  Public
  Fragment network build optimisation

  Python

  •1•2•6•0•Updated Mar 24, 2025Mar 24, 2025

• docker-neo4j

  Public
  A specialised build of neo4j used by a number of projects

  Shell

  •3•0•6•0•Updated Mar 23, 2025Mar 23, 2025

• squonk2-data-manager-workflow-engine

  Public
  The Schema and Decoder for Data Manager Workflows

  squonk2

  Python

  •

  MIT License

  •0•0•0•0•Updated Mar 21, 2025Mar 21, 2025

• bandr

  Public
  (PostgreSQL) Backup and recovery container images (OpenShift)

  Python

  •1•0•0•0•Updated Mar 19, 2025Mar 19, 2025

• squonk2-fastapi-ws-event-stream

  Public
  A FastAPI (Python) implementation of the Squonk2 (AS) Event Streaming service

  squonk2squonk2-event-stream-service

  Python

  •0•0•0•0•Updated Mar 17, 2025Mar 17, 2025

• squonk2-data-manager-job-decoder

  Public
  Provides decoding capabilities for Job definitions

  squonk2

  Python

  •

  MIT License

  •0•0•0•0•Updated Mar 14, 2025Mar 14, 2025

• squonk2-protobuf

  Public
  Informatics Matters cross-product protocol buffers

  squonk2

  Python

  •

  MIT License

  •0•0•0•0•Updated Mar 14, 2025Mar 14, 2025

• virtual-screening

  Public
  Virtual screening tools and Squonk2 jobs

  squonk2squonk2-jobs

  Python

  •

  Apache License 2.0

  •1•5•1•0•Updated Feb 25, 2025Feb 25, 2025

• docker-neo4j-ansible

  Public
  Ansible Playbooks (and Roles) for docker-neo4j

  Jinja

  •

  Apache License 2.0

  •0•0•0•1•Updated Feb 20, 2025Feb 20, 2025

• fragmentor-k8s-orchestration

  Public
  Ansible playbooks for kubernetes deployment of the fragmentor

  Jinja

  •0•0•0•0•Updated Feb 19, 2025Feb 19, 2025

• ansible-infrastructure

  Public
  Ansible logic for Kubernetes infrastructure provisioning

  Jinja

  •0•1•0•3•Updated Feb 17, 2025Feb 17, 2025

• squonk-frontend

  Public
  Monorepo for all Squonk (v2) apps and libraries

  Apache License 2.0

  •0•0•0•0•Updated Feb 9, 2025Feb 9, 2025

• squonk2-account-server-js-client

  Public
  Generates a JS client and docs for the Account Server API

  squonk2

  MIT License

  •0•1•0•0•Updated Feb 1, 2025Feb 1, 2025

• squonk2-data-manager-js-client

  Public
  Generates a JS client and docs for the Squonk Data Manager API

  squonk2

  MIT License

  •0•2•0•1•Updated Jan 31, 2025Jan 31, 2025

• mini-apps-pose-viewer

  Public
  Pose viewer

  TypeScript

  •0•0•1•0•Updated Jan 30, 2025Jan 30, 2025

• sdf-parser

  Public
  Converts a sd file into a key value typescript object

  TypeScript

  •1•0•0•0•Updated Jan 30, 2025Jan 30, 2025

• fragnet

  Public
  Fragment network tooling

  Java

  •

  Apache License 2.0

  •0•1•20•1•Updated Jan 29, 2025Jan 29, 2025

• squonk2-data-manager-ui-ansible

  Public
  Ansible (AWX) Kubernetes deployment scripts for the Mini-Apps Data-Tier UI

  squonk2

  Jinja

  •0•0•0•0•Updated Jan 29, 2025Jan 29, 2025

• squonk2-data-manager-metadata

  Public
  A metadata package for the Data Tier Data Manager service

  squonk2

  Python

  •

  MIT License

  •0•0•1•0•Updated Jan 28, 2025Jan 28, 2025

• squonk-react-mui-theme

  Public
  Material UI theme used in Squonk's React applications

  TypeScript

  •

  Apache License 2.0

  •0•2•0•7•Updated Jan 20, 2025Jan 20, 2025

• squonk2-data-manager-job-operator

  Public
  An arbitrary Job-execution operator for the Data Manager API

  k8s-operatorsquonk2

  Python

  •

  MIT License

  •0•0•0•0•Updated Dec 20, 2024Dec 20, 2024

• squonk2-data-manager-jupyter-operator

  Public
  A Kubernetes operator for Jupyer

  k8s-operatorsquonk2

  Python

  •

  Apache License 2.0

  •0•0•4•0•Updated Dec 20, 2024Dec 20, 2024

• docker-keycloak

  Public
  A specialised keycloak container image

  Dockerfile

  •

  MIT License

  •2•0•1•0•Updated Dec 13, 2024Dec 13, 2024

• squonk2-python-cl-tools

  Public
  squonk2

  Python

  •

  MIT License

  •0•0•0•0•Updated Dec 9, 2024Dec 9, 2024

• squonk2-python-client

  Public
  Data Manager API Utilities

  squonk2

  Python

  •

  MIT License

  •0•0•0•0•Updated Dec 9, 2024Dec 9, 2024

• bandr-ansible

  Public
  Ansible/AWX playbooks to support backup and recovery deployment

  Jinja

  •0•0•0•0•Updated Dec 4, 2024Dec 4, 2024

• trigger-awx-action

  Public
  A GitHub Action that triggers execution of a named template on an AWX server

  Shell

  •

  Apache License 2.0

  •0•2•0•0•Updated Dec 3, 2024Dec 3, 2024