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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,54 @@ | ||
| { | ||
| "imageTag": "latest", | ||
| "imageName": "busybox", | ||
| "commandsToExecute": [ | ||
| "echo", | ||
| "Hello Docker!" | ||
| ], | ||
| "inputs": [ | ||
| { | ||
| "fullFileName": "/mnt/data/NA12878_24RG_small.hg38.bam", | ||
| "sourceUrl": "s3://gatk-test-data/wgs_bam/NA12878_24RG_hg38/NA12878_24RG_small.hg38.bam", | ||
| "sasStrategy": "SchemeConverter" | ||
| }, | ||
| { | ||
| "fullFileName": "/mnt/data/ENCFF031ARQ.subsampled.400.fastq.gz", | ||
| "sourceUrl": "gs://encode-pipeline-test-samples/encode-atac-seq-pipeline/ENCSR356KRQ/fastq_subsampled/rep2/pair2/ENCFF031ARQ.subsampled.400.fastq.gz", | ||
| "sasStrategy": "SchemeConverter" | ||
| }, | ||
| { | ||
| "fullFileName": "/mnt/data/ENCFF590SYZ.subsampled.400.fastq.gz", | ||
| "sourceUrl": "gs://encode-pipeline-test-samples/encode-atac-seq-pipeline/ENCSR356KRQ/fastq_subsampled/rep2/pair2/ENCFF590SYZ.subsampled.400.fastq.gz", | ||
| "sasStrategy": "SchemeConverter" | ||
| }, | ||
| { | ||
| "fullFileName": "/mnt/data/ENCFF734PEQ.subsampled.400.fastq.gz", | ||
| "sourceUrl": "gs://encode-pipeline-test-samples/encode-atac-seq-pipeline/ENCSR356KRQ/fastq_subsampled/rep2/pair2/ENCFF734PEQ.subsampled.400.fastq.gz", | ||
| "sasStrategy": "SchemeConverter" | ||
| }, | ||
| { | ||
| "fullFileName": "/mnt/data/ENCFF007USV.subsampled.400.fastq.gz", | ||
| "sourceUrl": "gs://encode-pipeline-test-samples/encode-atac-seq-pipeline/ENCSR356KRQ/fastq_subsampled/rep2/pair2/ENCFF007USV.subsampled.400.fastq.gz", | ||
| "sasStrategy": "SchemeConverter" | ||
| }, | ||
| { | ||
| "fullFileName": "/mnt/data/ENCFF886FSC.subsampled.400.fastq.gz", | ||
| "sourceUrl": "gs://encode-pipeline-test-samples/encode-atac-seq-pipeline/ENCSR356KRQ/fastq_subsampled/rep2/pair2/ENCFF886FSC.subsampled.400.fastq.gz", | ||
| "sasStrategy": "SchemeConverter" | ||
| }, | ||
| { | ||
| "fullFileName": "/mnt/data/ENCFF573UXK.subsampled.400.fastq.gz", | ||
| "sourceUrl": "gs://encode-pipeline-test-samples/encode-atac-seq-pipeline/ENCSR356KRQ/fastq_subsampled/rep2/pair2/ENCFF573UXK.subsampled.400.fastq.gz", | ||
| "sasStrategy": "SchemeConverter" | ||
| } | ||
| ], | ||
| "outputs": [ | ||
| { | ||
| "fullFileName": "<LOCAL_PATH>", | ||
| "targetUrl": "<TARGET_URL>", | ||
| "sasStrategy": "None" | ||
| } | ||
| ] | ||
| } | ||
|
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