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Meren Lab

66 followers
Germany
http://merenlab.org
meren@hifmb.de

Overview
Repositories 23
Projects
Packages
People 1

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Overview
Repositories
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anvio Public

An analysis and visualization platform for 'omics data

Python 474 148
oligotyping Public

Exploring microbial patterns through subtle nucleotide variation within 16S rRNA gene tag sequences of closely related taxa

Python 39 22
illumina-utils Public

A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).

Python 91 31

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Showing 10 of 23 repositories

anvio Public
An analysis and visualization platform for 'omics data

Python 474 GPL-3.0 148 168 18 Updated Jun 11, 2025
anvio.org Public
The anvi'o community web page

HTML 5 12 3 1 Updated Jun 5, 2025
merenlab.org Public
Web content for Meren Lab

HTML 11 MIT 31 2 0 Updated Jun 5, 2025
scholarly-report Public
A few tools to generate reports for a bunch of scientists using their Google Scholar profiles.

Python 0 GPL-3.0 0 0 0 Updated May 30, 2025
rosalind Public
A simple Meren Lab bot to notify our Slack regarding our jobs on the HPC System ROSA at UOL

Python 0 0 0 0 Updated Apr 18, 2025
clusterize Public Forked from ekiefl/clusterize
The most basic SLURM wrapper

Python 0 MIT 2 0 0 Updated Feb 4, 2025
reads-for-assembly Public
Simulate metagenomic short reads from one or more populations.

Python 26 GPL-2.0 4 0 0 Updated Jan 29, 2025
public-marine-omics-metadata Public
Semi-curated metadata for marine metagenomes (and other 'omics data types)

R 1 0 4 0 Updated Sep 18, 2024
oligotyping Public
Exploring microbial patterns through subtle nucleotide variation within 16S rRNA gene tag sequences of closely related taxa

Python 39 GPL-2.0 22 5 0 Updated Jun 24, 2024
illumina-utils Public
A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).

Python 91 GPL-2.0 31 7 1 Updated Dec 16, 2023

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