EGG Longitudinal Analysis

Tools for longitudinal analysis within the EGG (Early Growth Genetics) Consortium.

Installation

• Install pak

  temp_library <- file.path(".", "R")
  dir.create(temp_library, recursive = TRUE)
  .libPaths(temp_library)
  utils::install.packages(
    pkgs = "pak",
    lib = temp_library,
    repos = sprintf(
      "https://r-lib.github.io/p/pak/stable/%s/%s/%s",
      .Platform[["pkgType"]], R.Version()[["os"]], R.Version()[["arch"]]
    )
  )

• Install eggla and its dependencies

  library(pak)
  VERSION <- "latest"
  utils::download.file(
    url = sprintf(
      "https://raw.githubusercontent.com/mcanouil/eggla/%s/.github/.devcontainer/eggla/R/pkg.lock",
      VERSION
    ),
    destfile = "pkg.lock"
  )
  lockfile_install(lockfile = "pkg.lock", lib = temp_library)
  pkg_install(sprintf("mcanouil/eggla@%s", VERSION), lib = temp_library, upgrade = FALSE, dependencies = FALSE)

Docker Images

• docker pull ghcr.io/mcanouil/eggla:devel.
• docker pull ghcr.io/mcanouil/eggla:latest.

License

MIT © Mickaël Canouil, Nicole Warrington, Kimberley Burrows, and Anni Heiskala.

Code of Conduct

Please note that the eggla project is released with a Contributor Code of Conduct.
By contributing to this project, you agree to abide by its terms.