-
Notifications
You must be signed in to change notification settings - Fork 0
lake-chao/protein-secondary-structure-prediction
Folders and files
Name | Name | Last commit message | Last commit date | |
---|---|---|---|---|
Repository files navigation
Description of files list_train: list of pdb entries used as training dataset list_test: list of pdb entries used as test dataset list_validate: list of pdb entries used as validation dataset ss2.py: the python script used to build, train, and test the LocalNet as described in the manuscript train.sh: Linux shell script for running the training program ss2.py ss3.train: training dataset for window of 7 residues extracted from list_train ss3.test: training dataset for window of 7 residues extracted from list_test ss3.validate: training dataset for window of 7 residues extracted from list_validate for other datasets ss4: for window of 9 residues ss5: for window of 11 residues ss6: for window of 13 residues ss7: for window of 15 residues ss8: for window of 17 residues ss9: for window of 19 residues ssa: for window of 21 residues out00.model-16*: saved model with best accuracy for dataset of window of 7 residues out01.model-10*: saved model with best accuracy for dataset of window of 9 residues out02.model-17*: saved model with best accuracy for dataset of window of 11 residues out03.model-19*: saved model with best accuracy for dataset of window of 13 residues out04.model-7*: saved model with best accuracy for dataset of window of 15 residues out05.model-6*: saved model with best accuracy for dataset of window of 17 residues out06.model-7*: saved model with best accuracy for dataset of window of 19 residues out07.model-12*: saved model with best accuracy for dataset of window of 21 residues
About
No description, website, or topics provided.
Resources
Stars
Watchers
Forks
Releases
No releases published
Packages 0
No packages published