Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Support missing input/output and missing rate law #298

Merged
merged 1 commit into from
Feb 27, 2024
Merged

Support missing input/output and missing rate law #298

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
14 changes: 9 additions & 5 deletions mira/sources/amr/stockflow.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -109,13 +109,17 @@ def template_model_from_amr_json(model_json) -> TemplateModel:
and link['source'] != input
and link['source'] not in aux_expressions)]

input_concepts = [concepts[input].copy(deep=True)]
output_concepts = [concepts[output].copy(deep=True)]
input_concepts = [concepts[input].copy(deep=True)] if input else []
output_concepts = [concepts[output].copy(deep=True)] if output else []
controller_concepts = [concepts[i].copy(deep=True) for i in controllers]

rate_expr = safe_parse_expr(flow['rate_expression'], local_dict=symbols)
for aux, aux_expr in aux_expressions.items():
rate_expr = rate_expr.subs(aux, aux_expr)
if 'rate_expression' in flow:
rate_expr = safe_parse_expr(flow['rate_expression'],
local_dict=symbols)
for aux, aux_expr in aux_expressions.items():
rate_expr = rate_expr.subs(aux, aux_expr)
else:
rate_expr = None

templates.extend(
transition_to_templates(
Expand Down
Loading