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Pull requests: galaxyproject/tools-iuc

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Pull requests list

New tool addition: MerquryFK HapPlot tool
#6801 opened Feb 26, 2025 by SaimMomin12 • Draft
3 of 5 tasks
Fixes tests from tools/artic
#6800 opened Feb 25, 2025 by SaimMomin12 Loading…
3 of 5 tasks
5
Add autoBIGS to IUC Toolshed
#6799 opened Feb 24, 2025 by RealYHD Loading…
3 of 5 tasks
35
umi-tools fixes
#6798 opened Feb 24, 2025 by bernt-matthias Loading…
5 tasks
Add linter exceptions for 24.2
#6795 opened Feb 24, 2025 by bernt-matthias Loading…
3 of 5 tasks
Updating tools/checkm2 from version 1.0.2 to 1.1.0
#6793 opened Feb 24, 2025 by gxydevbot Loading…
1
Updating tools/artic from version 1.6.0 to 1.6.1
#6792 opened Feb 24, 2025 by gxydevbot Loading…
1
Add mercat2
#6791 opened Feb 24, 2025 by SantaMcCloud Loading…
3 of 5 tasks
4
Minor fixes to tool_data_table_conf and related files for clair3 and artic
#6790 opened Feb 22, 2025 by pvanheus Loading…
3 of 5 tasks
16
Adding rdeval
#6778 opened Feb 18, 2025 by richard-burhans Loading…
3 of 5 tasks
26
Update funannotate
#6774 opened Feb 17, 2025 by bernt-matthias Loading…
3 of 5 tasks
including ggplot boplot and barplot; update to 3.5.1
#6771 opened Feb 17, 2025 by hechth Loading…
4 tasks done
Add mmseqs2
#6764 opened Feb 14, 2025 by Minamehr Loading…
2 tasks
5
Add normalize_x to Phyloseq_plot_bar and fix galaxy wrapper inputs
#6762 opened Feb 14, 2025 by MaraBesemer Loading…
5 tasks
2
Add ampvis2 export otu
#6748 opened Feb 11, 2025 by paulzierep Loading…
3 of 5 tasks
5
Updating tools/freyja from version 1.5.2 to 1.5.3
#6728 opened Feb 10, 2025 by gxydevbot Loading…
1
Cnvkit: update to 3.12 (Original plan to downgrade it to 3.10, but this affected the tools function)
#6720 opened Feb 4, 2025 by khaled196 Loading…
1 of 5 tasks
10
update ggplot scatterplot tool
#6715 opened Feb 3, 2025 by hechth Loading…
3 tasks done
1
7
updated volcanoplot to use column names
#6714 opened Feb 3, 2025 by hechth Loading…
3 tasks done
1
1
Updating tools/picrust2 from version 2.5.3 to 2.6.0
#6712 opened Feb 3, 2025 by gxydevbot Loading…
Updating tools/sra-tools from version 3.1.1 to 3.2.0
#6704 opened Jan 27, 2025 by gxydevbot Loading…
1
[WIP] EMBOSS v6
#6687 opened Jan 22, 2025 by shiltemann Loading…
4 of 5 tasks
Updating tools/homer from version 4.11 to 5.1
#6682 opened Jan 20, 2025 by gxydevbot Loading…
Update pharokka DM
#6680 opened Jan 16, 2025 by paulzierep Loading…
3 of 5 tasks
3
Updating tools/stringtie from version 2.2.3 to 3.0.0
#6673 opened Jan 13, 2025 by gxydevbot Loading…
ProTip! Updated in the last three days: updated:>2025-02-23.