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Merged
merged 22 commits into from
Mar 24, 2025
Merged

Add workflow: genome annotation with Maker #631

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1ce1f00
add workflow: annotation a genome with maker
rlibouba Dec 11, 2024
60b9c0b
Merge branch 'galaxyproject:main' into add_wf_annotation_maker
rlibouba Dec 12, 2024
356d164
some modification
rlibouba Dec 17, 2024
364eb9f
error typo
rlibouba Dec 17, 2024
89c0035
correct error
rlibouba Dec 18, 2024
38d88ae
correct error
rlibouba Dec 18, 2024
e617648
correct error
rlibouba Dec 18, 2024
da361e7
Merge branch 'galaxyproject:main' into add_wf_annotation_maker
rlibouba Dec 18, 2024
bc44bb9
Update Genome_annotation_with_maker_short_tests.yml
rlibouba Dec 18, 2024
4d0a045
add BUSCO lineage & modifications
rlibouba Mar 10, 2025
ba3f76c
fix lint
rlibouba Mar 10, 2025
301dfee
Use text parameter value restriction
mvdbeek Mar 10, 2025
cc9e163
Small modification
rlibouba Mar 10, 2025
3d63e86
error test
rlibouba Mar 11, 2025
cc72c4c
change cached_db
rlibouba Mar 11, 2025
2af1607
fix test error
rlibouba Mar 12, 2025
e8fecb3
fiw test error
rlibouba Mar 12, 2025
e0b5275
fix error tests
rlibouba Mar 17, 2025
ea930b3
fix error tests
rlibouba Mar 17, 2025
a02add1
fix lint
rlibouba Mar 17, 2025
0949218
error test
rlibouba Mar 17, 2025
c2856ff
add description
rlibouba Mar 20, 2025
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13 changes: 13 additions & 0 deletions workflows/genome_annotation/annotation-maker/.dockstore.yml
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version: 1.2
workflows:
- name: main
subclass: Galaxy
publish: true
primaryDescriptorPath: /Genome_annotation_with_maker_short.ga
testParameterFiles:
- /Genome_annotation_with_maker_short_tests.yml
authors:
- name: Romane Libouban
email: romane.libouban@irisa.fr
orcid: 0009-0001-4920-9951

5 changes: 5 additions & 0 deletions workflows/genome_annotation/annotation-maker/CHANGELOG.md
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# Changelog

## [0.1] - 2025-03-06

Initial version of the genome annotation workflow with maker.
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