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chore: fix line endings, white space, typos #622

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jsstevenson
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also includes a bunch of additional changes being made by precommit (see #621)

@korikuzma
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korikuzma commented Dec 20, 2024

Hm. This PR points out that type is being removed from ga4gh digest generation... I don't think this is what we want since this would change all computed identifiers. @ahwagner @larrybabb

Update: I wonder if it's something with MSP since type is a key for ga4gh identifiable objects: https://github.com/ga4gh/vrs/blob/2.0.0-ballot.2024-11/schema/vrs/vrs-source.yaml#L37-L39

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@korikuzma I'm closing this for now -- #621 covers everything I noticed here except for a typo ("grater" -> "greater"). Can reopen to fix the typo later.

jsstevenson added a commit that referenced this pull request Jan 2, 2025
I noticed in #622 that the latest commit on this branch seemed to be in violation of some precommit hooks, so small changes to the schema source were introducing downstream changes to a bunch of unrelated def/json files.

This PR

* catches up on those changes and
* adds a precommit check to github actions to help contributors remember to run appropriate make commands/formatting hooks in their editors (or to install precommit themselves).
@larrybabb larrybabb deleted the fix-typos branch February 11, 2025 12:50
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