Update SVPileup.scala

fulcrumgenomics · Feb 3, 2022 · 6b8b5d9 · 6b8b5d9
1 parent 1dfaa41
commit 6b8b5d9
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/src/main/scala/com/fulcrumgenomics/fgsv/tools/SVPileup.scala b/src/main/scala/com/fulcrumgenomics/fgsv/tools/SVPileup.scala
@@ -6,8 +6,9 @@ import com.fulcrumgenomics.bam.{Bams, Template}
 import com.fulcrumgenomics.commons.util.{LazyLogging, SimpleCounter}
 import com.fulcrumgenomics.fasta.SequenceDictionary
 import com.fulcrumgenomics.fgsv.cmdline.{ClpGroups, SVTool}
+import com.fulcrumgenomics.bam.api.SamOrder
 import com.fulcrumgenomics.fgsv.util.EvidenceType._
-import com.fulcrumgenomics.fgsv.util.{AlignmentBlock, EvidenceType, PutativeBreakpoint}
+import com.fulcrumgenomics.fgsv.util.{AlignmentBlock, BlockOrigin, EvidenceType, PutativeBreakpoint}
 import com.fulcrumgenomics.sopt.{arg, clp}
 import com.fulcrumgenomics.util.{Io, ProgressLogger}