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Bruno M. Grande. Genome-wide discovery of somatic coding and noncoding mutations in pediatric endemic and sporadic Burkitt lymphoma. Blood 2019. #1858

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Rima-Waleed opened this issue Jul 18, 2023 · 1 comment
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Rima-Waleed commented Jul 18, 2023

Publication: https://ashpublications.org/blood/article/133/12/1313/260486/Genome-wide-discovery-of-somatic-coding-and

Please keep this checklist for curation of a new study.

  • create an issue on datahub before curating a study (one issue per study) and copy this checklist to the issue tracker
  • List information of the dataset/paper in the issue, e.g. pmid, paper link, suppl file link
  • Document the curation process, e.g. how and by whom the data was transformed
  • Follow the data checklist
  • Create a pull request to datahub once the data is curated
  • Push to triage portal
  • Import into msk and public portal database
  • Update the default quick select study list see options for selecting tcga + non-tcga studies cbioportal#5831 (only for studies that are not overlapping with existing ones; only for human tumors, not cell lines)
  • Update cBioPortal news
@Rima-Waleed Rima-Waleed added new public study data-available Data available for curation labels Jul 18, 2023
@Rima-Waleed Rima-Waleed changed the title Burkitt lymphoma paper curation Bruno M. Grande. Genome-wide discovery of somatic coding and noncoding mutations in pediatric endemic and sporadic Burkitt lymphoma. Blood 2019. Jul 18, 2023
@Rima-Waleed
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Study updated to 2023 paper and released in cBioPortal: https://www.cbioportal.org/study/summary?id=mbn_sfu_2023

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