Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update orientation for allen cord example #53

Merged
merged 1 commit into from
Jul 22, 2024

Conversation

adamltyson
Copy link
Member

Now the allen cord atlas has been updated, and the meshes are in the correct orientation, this example needs to be updated. The saggital orientation didn't make much sense for the cord example. This new script makes the figure as expected:
Screenshot from 2024-07-22 12-29-34

Copy link

codecov bot commented Jul 22, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 0.00%. Comparing base (7044b19) to head (3aa62bd).

Additional details and impacted files
@@          Coverage Diff          @@
##            main     #53   +/-   ##
=====================================
  Coverage   0.00%   0.00%           
=====================================
  Files          5       5           
  Lines        280     280           
=====================================
  Misses       280     280           

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

@imagesc-bot
Copy link

This pull request has been mentioned on Image.sc Forum. There might be relevant details there:

https://forum.image.sc/t/allen-spinal-cord-atlas-appears-disfigured-in-python/99256/9

@alessandrofelder alessandrofelder merged commit 9409304 into main Jul 22, 2024
23 checks passed
@alessandrofelder alessandrofelder deleted the allen_cord_example branch July 22, 2024 16:24
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants