invalid command in gajoe while using external pool #1941
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Hi, I met an issue that, when I tried to use command gajoe -p/gajoe --pool to fit my external pool in, it reported an error like: gajoe -p ******* For doubts/questions please visit SAXIER forum: ******* ******* In case of bugs please refer to: ******* Is there any clue what could cause this error? Did i misuse the option? I really appreciate your help! |
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Replies: 1 comment 3 replies
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The interface of gajoe changed in 3.2.x, IIRC. If you can, please update to ATSAS-4.0.0. Besides that, I think you probably want:
The above is from memory and untested right now. But it should work this way or similar. |
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Hi, thank you so much for your kind reply. Sorry I couldn't find the latest ATSAS-4.0.0 from this webpage: https://www.embl-hamburg.de/biosaxs/atsas-online/download.php. Am I in the wrong one? And the commands you offered seem work well with my models, thanks again! |
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Thank you so much! |
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The interface of gajoe changed in 3.2.x, IIRC. If you can, please update to ATSAS-4.0.0.
Further, all applications have the -h/--help options to list their options.
Besides that, I think you probably want:
ffmaker --pool=size.csv --output=intensities.csv [models]gajoe --intensity=intensity.csv --size=size.csv [data]The above is from memory and untested right now. But it should work this way or similar.