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  1. CoreTracker CoreTracker Public

    CoreTracker, a codon reassignment tracker

    Python 6 3

  2. GATC GATC Public

    Genetic Algorithm for gene Tree Construction/Correction optimal under sequence likelihood and reconciliation score

    C 4

  3. superrec2 superrec2 Public

    Run and compare algorithms for phylogenetic reconciliation and super-reconciliation

    Python 4 1

  4. profileNJ profileNJ Public

    Forked from maclandrol/profileNJ

    Genome evolution-aware gene trees correction without losing sequence information

    Python 3

  5. sowing sowing Public

    Immutable tree data structure in Python, with utilities to build, traverse, edit, and serialize trees

    Python 3 1

  6. SuperReconciliation SuperReconciliation Public

    Implementation of the Super-Reconciliation model for reconciling a set of trees accounting for segmental duplications and losses.

    C++ 2 1

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