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v1.0.0

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@tronbfxdev tronbfxdev released this 27 Apr 09:24
· 117 commits to master since this release

Changes:

  • Migrate to conda environment
  • Added tests + automate tests in gitlab
  • Improved some skipping steps
  • Chain several Picard commands so less intermdediate IO is happening
  • Avoid using samtools at all, using Picard from within GATK4
  • Added some extra files to output