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SPITFIRE refactor of mortality #1357

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Refactors the SPITFIRE code for tree mortality.

Description:

Should be bit-for-bit. Just reorganizes the subroutines and creates some helper functions and unit tests

Expectation of Answer Changes:

Should be bit 4 bit

Checklist

All checklist items must be checked to enable merging this pull request:

Contributor

  • The in-code documentation has been updated with descriptive comments
  • The documentation has been assessed to determine if updates are necessary

Integrator

  • FATES PASS/FAIL regression tests were run
  • Evaluation of test results for answer changes was performed and results provided

Test Results:

Ran preliminary tests that were b4b- will run again

CTSM (or) E3SM (specify which) test hash-tag: ctsm5.3.029

CTSM (or) E3SM (specify which) baseline hash-tag: ctsm5.3.029

FATES baseline hash-tag: sci.1.81.1_api.38.0.0

Test Output:

@glemieux glemieux added type: refactor Restructures code without changing functionality science: fire labels Mar 13, 2025
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glemieux commented Mar 17, 2025

During the fates-ctsm standup this morning, @adrifoster noted that we should bring in #1360 (and #1362?) prior to this PR.

@glemieux glemieux mentioned this pull request Mar 17, 2025
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