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Include samtools stats pre dedup & post dedup in overview tables #976

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Include samtools stats pre dedup & post dedup in overview tables

Include samtools stats pre dedup & post dedup in overview tables #976

Run pipeline with test data (latest-everything) | (docker) | (ivar - bcftools)

Run pipeline with test data (latest-everything) | (docker) | (ivar - bcftools)
succeeded Feb 4, 2025 in 16m 40s
Set up job
2s
Check out pipeline code
1s
Free some space
0s
Free Disk Space (Ubuntu)
2m 27s
Install Nextflow
7s
Set up Apptainer
0s
Set up Singularity
0s
Set up Miniconda
0s
Set up Conda
0s
Clean up Disk space
4s
Run pipeline with small test data with variant caller ivar and consensus caller bcftools
13m 56s
Post Install Nextflow
0s
Post Check out pipeline code
0s
Complete job
0s