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Genentech

Dedicated to pursuing groundbreaking science to discover and develop medicines

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  1. equifold Public

    Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

    Python 120 17

  2. scimilarity Public

    A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.

    Python 183 7

  3. polygraph Public

    Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of regulatory elements.

    Jupyter Notebook 28

  4. gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Python 256 30

Repositories

Showing 10 of 114 repositories
  • decima Public

    Decima is a Python library to train sequence models on single-cell RNA-seq data.

    Jupyter Notebook 32 4 1 0 Updated Apr 10, 2025
  • nfnull Public
    Python 0 MIT 0 0 0 Updated Apr 10, 2025
  • beignet Public

    A standard library for biological research.

    Python 22 MIT 5 32 23 Updated Apr 10, 2025
  • Jupyter Notebook 0 0 0 0 Updated Apr 9, 2025
  • spex_bundle Public
    PLpgSQL 1 0 0 0 Updated Apr 9, 2025
  • phase1b Public
    R 5 2 17 0 Updated Apr 8, 2025
  • spex Public
    Jupyter Notebook 0 0 1 0 Updated Apr 8, 2025
  • SpatialAgent Public
    54 MIT 2 0 0 Updated Apr 5, 2025
  • Jupyter Notebook 0 0 0 0 Updated Apr 2, 2025
  • Python 0 0 0 0 Updated Apr 2, 2025

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