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satisfy flake8 - check_schema.py #2245

satisfy flake8 - check_schema.py

satisfy flake8 - check_schema.py #2245

name: '[test] unit test'
on: [push]
jobs:
lint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.10
uses: actions/setup-python@v4
with:
python-version: '3.10'
- run: pip install flake8
- run: flake8 .
unit-tests:
runs-on: ubuntu-latest
env:
# unit tests should not need tokens
# KEYCLOAK_CLIENT_ID: ${{ secrets.KEYCLOAK_CLIENT_ID }}
# KEYCLOAK_CLIENT_SECRET: ${{ secrets.KEYCLOAK_CLIENT_SECRET }}
SIIBRA_LOG_LEVEL: DEBUG
strategy:
fail-fast: false
matrix:
python-version: [ '3.12', '3.11', '3.10', '3.9', '3.8', '3.7' ]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install -U .
pip install -r requirements-test.txt
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
- name: Install test dependencies
run: pip install pytest pytest-cov coverage
- name: Run test with pytest
run: |
echo "Using github.ref: $GITHUB_REF"
if [[ "$GITHUB_REF" != "refs/heads/main" ]]
then
export FAST_RUN=1
fi
pytest -rx
e2e-tests:
runs-on: ${{ matrix.os }}
env:
# KEYCLOAK_CLIENT_ID: ${{ secrets.KEYCLOAK_CLIENT_ID }}
# KEYCLOAK_CLIENT_SECRET: ${{ secrets.KEYCLOAK_CLIENT_SECRET }}
FOO: BAR
strategy:
fail-fast: false
matrix:
os: [ 'ubuntu-latest', 'windows-latest' ]
python-version: [ '3.12', '3.11', '3.10', '3.9', '3.8', '3.7' ]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Cache SIIBRA_CACHEDIR
uses: actions/cache@v3
with:
path: ${{ runner.temp }}
key: ${{ runner.os }}
restore-keys: |
${{ runner.os }}
- name: Install dependencies
shell: bash
run: |
python -m pip install --upgrade pip
python -m pip install -U .
pip install -r requirements-test.txt
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
- name: Install test dependencies
run: pip install pytest pytest-cov coverage
- name: Run test with pytest
shell: bash
run: |
export SIIBRA_CACHEDIR=${{ runner.temp }}
echo "Using github.ref: $GITHUB_REF"
if [[ "$GITHUB_REF" != "refs/heads/main" ]]
then
export FAST_RUN=1
fi
pytest -rx e2e
check-importable:
runs-on: ubuntu-latest
env:
KEYCLOAK_CLIENT_ID: ${{ secrets.KEYCLOAK_CLIENT_ID }}
KEYCLOAK_CLIENT_SECRET: ${{ secrets.KEYCLOAK_CLIENT_SECRET }}
strategy:
fail-fast: false
matrix:
python-version: [ '3.12', '3.11', '3.10', '3.9', '3.8', '3.7' ]
steps:
- uses: actions/checkout@v3
- name: Set up Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install -U .
- name: cd to / and try to import
run: |
cd / && python -c 'import siibra'