This is the repository for scripts and similar things developed during my bachelor thesis. I am currently working on this project under the title "Efficient Bayesian inference for a host repertoire model in the probabilistic programming language TreePPL" with Mariana Pires Braga, Fredrik Ronquist and Niklas Wahlberg as supervisors
In this project I will be working on creating faster MCMC algorithms for the host repertoire model Braga et al. in the universal probabilistic programming language TreePPL.