Commit e0a8656 1 parent 2618412 commit e0a8656 Copy full SHA for e0a8656
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lines changed Original file line number Diff line number Diff line change @@ -1506,11 +1506,14 @@ def process_site_observation(
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"cmpd" : compound ,
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"xtalform_site" : xtalform_site ,
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"canon_site_conf" : canon_site_conf ,
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- "smiles" : smiles ,
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+ # "smiles": smiles,
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"seq_id" : ligand ,
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"chain_id" : chain ,
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}
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+ # smiles removed from check fields aand removed to defaults as
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+ # part of 1670
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+
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defaults = {
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"bound_file" : str (self ._get_final_path (bound_file )),
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"apo_solv_file" : str (self ._get_final_path (apo_solv_file )),
@@ -1525,6 +1528,7 @@ def process_site_observation(
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"ligand_smiles" : str (self ._get_final_path (ligand_smiles )),
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"ligand_sdf" : str (self ._get_final_path (ligand_sdf )),
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"pdb_header_file" : None ,
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+ "smiles" : smiles ,
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}
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index_data = {
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