msd_brain_seg_1e-4.yml

_base_: '../_base_/global_configs.yml'

batch_size: 4
iters: 30000


train_dataset:
  type: msd_brain_dataset
  dataset_root: Task01_BrainTumour/Task01_BrainTumour_phase0
  result_dir: data/Task01_BrainTumour/Task01_BrainTumour_phase1
  num_classes: 4
  transforms:
    - type: RandomCrop4D
      size: 128
      scale: [0.8, 1.2]
    - type: RandomRotation4D
      degrees: 90
      rotate_planes: [[1, 2], [1, 3],[2, 3]]
    - type: RandomFlip4D
      flip_axis: [1,2,3]
  mode: train


val_dataset:
  type: msd_brain_dataset
  dataset_root: Task01_BrainTumour/Task01_BrainTumour_phase0
  result_dir: data/Task01_BrainTumour/Task01_BrainTumour_phase1
  num_classes: 4
  transforms: []
  mode: val
  dataset_json_path: "data/Task01_BrainTumour/Task01_BrainTumour_raw/dataset.json"


test_dataset:
  type: msd_brain_dataset
  dataset_root: Task01_BrainTumour/Task01_BrainTumour_phase0
  result_dir: data/Task01_BrainTumour/Task01_BrainTumour_phase1
  num_classes: 4
  transforms: []
  mode: test
  dataset_json_path: "data/Task01_BrainTumour/Task01_BrainTumour_raw/dataset.json"

optimizer:
  type: AdamW
  weight_decay: 1.0e-4

lr_scheduler:
  type: PolynomialDecay
  decay_steps: 30000
  learning_rate: 0.0001
  end_lr: 0
  power: 0.9


loss:
  types:
    - type: MixedLoss
      losses:
        - type: CrossEntropyLoss
          weight: Null
        - type: DiceLoss
      coef: [1, 1]
  coef: [1]