hatchery.json

{
  "user-namespace": "jupyter-pods-qa-covid19",
  "sub-dir": "/lw-workspace",
  "user-volume-size": "10Gi",
  "sidecar": {
    "cpu-limit": "1.0",
    "memory-limit": "256Mi",
    "image": "quay.io/cdis/gen3fuse-sidecar:0.2.3",
    "env": {
      "NAMESPACE": "qa-covid19",
      "HOSTNAME": "qa-covid19.planx-pla.net"
    },
    "args": [],
    "command": [
      "/bin/bash",
      "/sidecarDockerrun.sh"
    ],
    "lifecycle-pre-stop": [
      "su",
      "-c",
      "echo test",
      "-s",
      "/bin/sh",
      "root"
    ]
  },
  "containers": [
    {
      "target-port": 8787,
      "cpu-limit": "1.0",
      "memory-limit": "1024Mi",
      "name": "R Studio 3.5",
      "image": "quay.io/cdis/rstudio:master",
      "env": {
        "DISABLE_AUTH": "true"
      },
      "args": [],
      "path-rewrite": "/",
      "use-tls": "false",
      "ready-probe": "/",
      "user-volume-location": "/home/rstudio/pd",
      "fs-gid": 100
    },
    {
      "target-port": 8787,
      "cpu-limit": "1.0",
      "memory-limit": "1024Mi",
      "name": "R Studio 3.6",
      "image": "quay.io/cdis/rstudio3.6:rstudio3.6-1.0.0",
      "env": {
        "DISABLE_AUTH": "true"
      },
      "args": [],
      "path-rewrite": "/",
      "use-tls": "false",
      "ready-probe": "/",
      "user-volume-location": "/home/rstudio/pd",
      "fs-gid": 100
    },
    {
      "target-port": 8787,
      "cpu-limit": "1.0",
      "memory-limit": "1024Mi",
      "name": "R Studio JHU map",
      "image": "quay.io/cdis/rstudio-jhumap:jhumap-1.0.0",
      "env": {
        "DISABLE_AUTH": "true"
      },
      "args": [],
      "path-rewrite": "/",
      "use-tls": "false",
      "ready-probe": "/",
      "user-volume-location": "/home/rstudio/pd",
      "fs-gid": 100
    }
  ],
  "more-configs": [
    {
      "type": "dockstore-compose:1.0.0",
      "path": "/hatchery-more-configs/gen3-igv.yaml",
      "name": "Gen3 IGV"
    },
    {
      "type": "dockstore-compose:1.0.0",
      "path": "/hatchery-more-configs/jupyter-covid19.yaml",
      "name": "A collection of Jupyter notebooks to explore health outcomes for COVID-19"
    }
  ]
}