AI Research: Large Language Models, Graph Neural Networks
Biology Research: Directed Evolution, Function Prediction, Binder Design
Email: tanyang.august@gmail.com
- [2025.4.19] 🏆 VenusREM achieves 1st place in ProteinGym Substitution and VenusMutHub mutation prediction Leaderboard.
- Tan Y, Liu C, Gao J, et al. VenusFactory: A Unified Platform for Protein Engineering Data Retrieval and Language Model Fine-Tuning. ACL Demo, 2025.
- Tan Y, Wang R, Wu B, et al. Retrieval-Enhanced Mutation Mastery: Augmenting Zero-Shot Prediction of Protein Language Model. ISMB/ECCB, 2025.
- Li S*, Tan Y*, Ke S, et al. Immunogenicity Prediction with Dual Attention Enables Vaccine Target Selection. ICLR, 2025.
- Li M*, Tan Y*, Ma X, et al. ProSST: Protein Language Modeling with Quantized Structure and Disentangled Attention. NeurIPS, 2024.
- Tan Y, Zhou B, Zheng L, et al. Semantical and Topological Protein Encoding Toward Enhanced Bioactivity and Thermostability. eLife, 2024.
- Tan Y, Zhang Z, Li M, et al. MedChatZH: A tuning LLM for traditional Chinese medicine consultations. Computers in Biology and Medicine, 2024.
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