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--fastq_join: partially restore abundance annotation handling
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src/fastqjoin.cc

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Original file line numberDiff line numberDiff line change
@@ -283,7 +283,7 @@ auto fastq_join(struct Parameters const & parameters) -> void
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fastq_get_header(infiles.forward.handle),
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static_cast<int>(fastq_get_header_length(infiles.forward.handle)),
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const_cast<char *>(final_quality.c_str()),
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0,
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static_cast<int>(fastq_get_abundance(infiles.forward.handle)),
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static_cast<int>(total + 1),
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-1.0);
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}
@@ -296,7 +296,7 @@ auto fastq_join(struct Parameters const & parameters) -> void
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static_cast<int>(needed),
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fastq_get_header(infiles.forward.handle),
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static_cast<int>(fastq_get_header_length(infiles.forward.handle)),
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0,
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static_cast<int>(fasta_get_abundance(infiles.forward.handle)),
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static_cast<int>(total + 1),
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-1.0,
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-1,

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