File tree 1 file changed +22
-20
lines changed
1 file changed +22
-20
lines changed Original file line number Diff line number Diff line change @@ -194,29 +194,31 @@ void results_show_blast6out_one(FILE * fp,
194
194
but only 12 when there is a hit. Fixed in VSEARCH.
195
195
*/
196
196
197
- if (not hp)
197
+ if (hp)
198
+ {
199
+ // if 'hp->strand' then 'minus strand' else 'plus strand'
200
+ const int qstart = hp->strand ? qseqlen : 1 ;
201
+ const int qend = hp->strand ? 1 : qseqlen;
202
+
203
+ fprintf (fp,
204
+ " %s\t %s\t %.1f\t %d\t %d\t %d\t %d\t %d\t %d\t %" PRIu64 " \t %d\t %d\n " ,
205
+ query_head,
206
+ db_getheader (hp->target ),
207
+ hp->id ,
208
+ hp->internal_alignmentlength ,
209
+ hp->mismatches ,
210
+ hp->internal_gaps ,
211
+ qstart,
212
+ qend,
213
+ 1 ,
214
+ db_getsequencelen (hp->target ),
215
+ -1 ,
216
+ 0 );
217
+ }
218
+ else
198
219
{
199
220
fprintf (fp, " %s\t *\t 0.0\t 0\t 0\t 0\t 0\t 0\t 0\t 0\t -1\t 0\n " , query_head);
200
221
}
201
-
202
- // if 'hp->strand' then 'minus strand' else 'plus strand'
203
- const int qstart = hp->strand ? qseqlen : 1 ;
204
- const int qend = hp->strand ? 1 : qseqlen;
205
-
206
- fprintf (fp,
207
- " %s\t %s\t %.1f\t %d\t %d\t %d\t %d\t %d\t %d\t %" PRIu64 " \t %d\t %d\n " ,
208
- query_head,
209
- db_getheader (hp->target ),
210
- hp->id ,
211
- hp->internal_alignmentlength ,
212
- hp->mismatches ,
213
- hp->internal_gaps ,
214
- qstart,
215
- qend,
216
- 1 ,
217
- db_getsequencelen (hp->target ),
218
- -1 ,
219
- 0 );
220
222
}
221
223
222
224
void results_show_uc_one (FILE * fp,
You can’t perform that action at this time.
0 commit comments