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INSTALL

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Installation Instructions

Obtaining the Latest Software

The latest version of scikits.cuda can be downloaded from the Bionet Code Repository.

Prerequisites

scikits.cuda requires that the following software packages be installed:

Most linear algebra functionality relies on CULA:

  • CULA (single precision version of the library is free-of-charge; requires registration).

To build the documentation, the following packages are also required:

The software has been tested on Linux; it should also work on other platforms supported by the above packages.

Building and Installation

To build and install the toolbox, download and unpack the source release and run:

python setup.py install

from within the main directory in the release. Sample code demonstrating how to use different parts of the toolbox is located in the demos/ subdirectory. Many of the high-level functions also contain doctests that describe their usage.

To rebuild the documentation, run:

make

from within the doc/ subdirectory and follow the directions.