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Integration Testing CI Test Failure on python 3.12 #800

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scverse-bot opened this issue Dec 4, 2024 · 4 comments
Closed

Integration Testing CI Test Failure on python 3.12 #800

scverse-bot opened this issue Dec 4, 2024 · 4 comments

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@scverse-bot
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The daily CI failed on test for spatialdata failed. Please go to the logs of the integration testing repo to review. @scverse/anndata

@LucaMarconato
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@ilan-gold the failing test is due to a recent version of Dask that is breaking things in a strange way. We are investigating this, but for the moment we added a constraint to consider Dask only up to 2024.11.2.

@LucaMarconato
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The latest main makes the integration tests succeed: https://github.com/scverse/integration-testing/actions/runs/12364196173.

@sophiamaedler
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sophiamaedler commented Jan 25, 2025

Wanted to follow up on this as dask is still limited to 2024.11.2 on the main branch at the moment. Is there anything else preventing an upgrade to dask 2024.12.1 that still needs to be addressed?
If not I'd love to upgrade as it would remove a warning I receive multiple times when ever I load a spatialdata object that is spamming up all of my log outputs (see dask/dask#11537).

@LucaMarconato
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Hi @sophiamaedler, unfortunately the latest Dask is not supported and there is not an easy solution. More details can be found here: #835 (comment).

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3 participants