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blast2go.loc.sample file not available #154

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gallardoalba opened this issue Jan 3, 2023 · 2 comments
Open

blast2go.loc.sample file not available #154

gallardoalba opened this issue Jan 3, 2023 · 2 comments

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@gallardoalba
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I wanted to run blast2go in my local instance, but I'm not able to find the blast2go.loc.sample file.
@peterjc
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peterjc commented Jan 4, 2023

Hmm, the file is here https://github.com/peterjc/galaxy_blast/blob/master/tool-data/blast2go.loc.sample and is listed in the manifest https://github.com/peterjc/galaxy_blast/blob/master/tools/blast2go/.shed.yml so ought to be in the Tool Shed bundle.

Looking at the current release at https://toolshed.g2.bx.psu.edu/view/peterjc/blast2go/8664c4c94764 I do see the file, tool-data/blast2go.loc.sample, so this could be a Galaxy bug.

Note however, I consider this wrapper to be obsolete since Blast2Go for pipelines was superseded by Blast2GO Command Line (CLI).

@gallardoalba
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Ok, thanks a lot!

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@peterjc @gallardoalba