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README.md

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# palamedes
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![Merge - Passing](https://github.com/mammothbio-os/palamedes/actions/workflows/merge.yaml/badge.svg) ![Release - Passing](https://github.com/mammothbio-os/palamedes/actions/workflows/release.yaml/badge.svg) ![PyPI - Version](https://img.shields.io/pypi/v/palamedes) ![Read The Docs - Version](https://readthedocs.org/projects/mammothbio-os-palamedes/badge/?version=stable)
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This repo contains a python package and CLI entrypoint which can be used to generate a list of [HGVS](https://github.com/biocommons/hgvs) variants representing the difference between 2 sequences, using a global alignment. The idea is to leverage the HGVS spec for more applications, since it provides a solid framework for maintaining a consistent set of rules and logic
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around variants.
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## Documentation
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Documentation for the project can be found [here](https://mammothbio-os-palamedes.readthedocs.io/en/stable/)
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## Installing
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Palamedes is packaged in PyPI, to install simply run: `pip install palamedes`

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