#549 (reopening #460) Leave LHS things displayed if site is turned off

Author: Adriána Kohanová

js/components/nglView/redux/dispatchActions.js

@@ -57,9 +57,7 @@ export const toggleMoleculeGroup = (molGroupId, summaryViewStage) => (dispatch,
     ).catch(error => {
       throw new Error(error);
     });
-    dispatch(
-      clearAfterDeselectingMoleculeGroup()
-    );
+    dispatch(clearAfterDeselectingMoleculeGroup({ molGroupId }));
   }
 };
 

js/components/preview/moleculeGroups/redux/dispatchActions.js

@@ -1,27 +1,16 @@
-import {
-  complexObjectTypes,
-  generateComplex,
-  generateMolecule,
-  generateSphere
-} from '../../molecule/molecules_helpers';
+import { generateSphere } from '../../molecule/molecules_helpers';
 import { VIEWS } from '../../../../constants/constants';
 import {
   decrementCountOfRemainingMoleculeGroupsWithSavingDefaultState,
   deleteObject,
   loadObject
 } from '../../../../reducers/ngl/dispatchActions';
 import {
-  removeFromComplexList,
-  removeFromProteinList,
-  removeFromSurfaceList,
-  removeFromFragmentDisplayList,
-  removeFromVectorOnList,
   resetSelectionState,
   setComplexList,
   setFilter,
   setFragmentDisplayList,
   setMolGroupSelection,
-  setObjectSelection,
   setVectorList,
   setVectorOnList
 } from '../../../../reducers/selection/actions';
@@ -33,90 +22,12 @@ import { setSortDialogOpen } from '../../molecule/redux/actions';
 import { resetCurrentCompoundsSettings } from '../../compounds/redux/actions';
 import { reloadSession } from '../../../snapshot/redux/dispatchActions';
 import { resetRestoringState } from '../../../../reducers/tracking/dispatchActions';
-import { selectJoinedMoleculeList } from '../../molecule/redux/selectors';
 import { URLS } from '../../../routes/constants';
 
-export const clearAfterDeselectingMoleculeGroup = ({ molGroupId, currentMolGroup, majorViewStage }) => (
-  dispatch,
-  getState
-) => {
-  dispatch(setObjectSelection([molGroupId]));
-
-  let site;
-  const state = getState();
-  const { fragmentDisplayList, complexList, proteinList, surfaceList, vectorOnList, vector_list } = state.selectionReducers;
-
-  const actionFragmentDisplayList = [];
-  const actionComplexList = [];
-  const actionProteinList = [];
-  const actionSurfaceList = [];
-  const actionVectorOnList = [];
-
-  // loop through all molecules
-  selectJoinedMoleculeList(state).forEach(mol => {
-    site = mol.site;
-
-    // remove Ligand
-    dispatch(
-      deleteObject(
-        Object.assign({ display_div: VIEWS.MAJOR_VIEW }, generateMolecule(mol.protein_code, mol.sdf_info)),
-        majorViewStage
-      )
-    );
-
-    // remove Complex, Protein, Surface
-    Object.keys(complexObjectTypes).forEach(type => {
-      dispatch(
-        deleteObject(
-          Object.assign(
-            { display_div: VIEWS.MAJOR_VIEW },
-            generateComplex(mol.protein_code, mol.sdf_info, mol.molecule_protein, type)
-          ),
-          majorViewStage
-        )
-      );
-    });
-
-    if (fragmentDisplayList.find(ligand => ligand === mol.id)) actionFragmentDisplayList.push(mol);
-    if (complexList.find(ligand => ligand === mol.id)) actionComplexList.push(mol);
-    if (proteinList.find(ligand => ligand === mol.id)) actionProteinList.push(mol);
-    if (surfaceList.find(ligand => ligand === mol.id)) actionSurfaceList.push(mol);
-    if (vectorOnList.find(ligand => ligand === mol.id)) actionVectorOnList.push(mol);
-  });
-  dispatch(setMolGroupOff(molGroupId, {
-    ligand: actionFragmentDisplayList,
-    protein: actionProteinList,
-    complex: actionComplexList,
-    surface: actionSurfaceList,
-    vector: actionVectorOnList
-  }));
-
-  // remove all Vectors
-  vector_list
-    .filter(v => v.site === site)
-    .forEach(item => {
-      dispatch(deleteObject(Object.assign({ display_div: VIEWS.MAJOR_VIEW }, item), majorViewStage));
-    });
-
-  dispatch(setObjectSelection(undefined));
-
+export const clearAfterDeselectingMoleculeGroup = ({ molGroupId }) => dispatch => {
   // remove all molecule orientations
   dispatch(setMoleculeOrientations({}));
-
-  // remove all selected ALCV of given site
-  currentMolGroup.mol_id.forEach(moleculeID => {
-    // remove Ligand, Complex, Vectors from selection
-    //Ligand
-    dispatch(removeFromFragmentDisplayList({ id: moleculeID }, true));
-    // Complex
-    dispatch(removeFromComplexList({ id: moleculeID }, true));
-    // Protein
-    dispatch(removeFromProteinList({ id: moleculeID }, true));
-    // Surface
-    dispatch(removeFromSurfaceList({ id: moleculeID }, true));
-    // Vectors
-    dispatch(removeFromVectorOnList({ id: moleculeID }, true));
-  });
+  dispatch(setMolGroupOff(molGroupId));
 };
 
 export const saveMoleculeGroupsToNglView = (molGroupList, stage, projectId) => dispatch => {
@@ -288,13 +199,7 @@ export const onDeselectMoleculeGroup = ({ moleculeGroup, stageSummaryView, major
   const mol_group_selection = state.selectionReducers.mol_group_selection;
   const selectionCopy = mol_group_selection.slice();
   const objIdx = mol_group_selection.indexOf(moleculeGroup.id);
-  dispatch(
-    clearAfterDeselectingMoleculeGroup({
-      molGroupId: moleculeGroup.id,
-      currentMolGroup,
-      majorViewStage
-    })
-  );
+  dispatch(clearAfterDeselectingMoleculeGroup({ molGroupId: moleculeGroup.id }));
   selectionCopy.splice(objIdx, 1);
   dispatch(
     deleteObject(

js/reducers/api/actions.js

@@ -59,11 +59,10 @@ export const setMolGroupOn = function(mol_group_id) {
   };
 };
 
-export const setMolGroupOff = function(mol_group_id, selectionGroups) {
+export const setMolGroupOff = function(mol_group_id) {
   return {
     type: constants.SET_MOL_GROUP_OFF,
-    mol_group_off: mol_group_id,
-    selectionGroups
+    mol_group_off: mol_group_id
   };
 };
 

js/reducers/tracking/dispatchActions.js

@@ -2299,26 +2299,11 @@ const handleArrowNavigationActionOfCompound = (action, isSelected, majorViewStag
 const handleMoleculeGroupAction = (action, isSelected, stageSummaryView, majorViewStage) => (dispatch, getState) => {
   const state = getState();
   if (action) {
-    const { selectionGroups, object_name } = action;
+    const { object_name } = action;
     let moleculeGroup = getMolGroup(object_name, state);
     if (moleculeGroup) {
       if (isSelected === true) {
         dispatch(selectMoleculeGroup(moleculeGroup, stageSummaryView));
-
-        for (const type in selectionGroups) {
-          if (selectionGroups.hasOwnProperty(type)) {
-            const typeGroup = selectionGroups[type];
-            for (const mol of typeGroup) {
-              if (type === 'ligand') {
-                dispatch(addType[type](majorViewStage, mol, colourList[mol.id % colourList.length], true, true));
-              } else if (type === 'vector') {
-                dispatch(addType[type](majorViewStage, mol, true));
-              } else {
-                dispatch(addType[type](majorViewStage, mol, colourList[mol.id % colourList.length], true));
-              }
-            }
-          }
-        }
       } else {
         dispatch(onDeselectMoleculeGroup({ moleculeGroup, stageSummaryView, majorViewStage }));
       }

js/reducers/tracking/trackingActions.js

@@ -47,7 +47,7 @@ export const findTrackAction = (action, state) => {
         }
       }
     } else if (action.type === apiConstants.SET_MOL_GROUP_OFF) {
-      const { mol_group_off, selectionGroups } = action;
+      const { mol_group_off } = action;
       let molGroupName = getMolGroupName(mol_group_off, state);
       trackAction = {
         type: actionType.SITE_TURNED_OFF,
@@ -56,7 +56,6 @@ export const findTrackAction = (action, state) => {
         object_type: actionObjectType.SITE,
         object_name: molGroupName,
         object_id: mol_group_off,
-        selectionGroups,
         text: `${actionDescription.SITE} ${molGroupName} ${actionDescription.TURNED_OFF}`
       };
     } else if (action.type === selectionConstants.SET_OBJECT_SELECTION) {