github action adopt uv (#57)

Author: darjeeling

.github/workflows/gh-pages.yml

@@ -3,7 +3,11 @@ name: Deploy Sphinx documentation to Github pages
 on:
   push:
     branches:
-       - main
+      - main
+
+env:
+  UV_SYSTEM_PYTHON: 1
+  UV_PYTHON_PREFERENCE: system
 
 jobs:
   docs:
@@ -14,10 +18,15 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v5
         with:
-          python-version: 3.9
-      
+          python-version: 3.13
+
+      - name: Install uv
+        uses: astral-sh/setup-uv@v3
+        with:
+          version: "0.5.1"
+
       - name: Install dependencies
-        run: pip install -e '.[docs]'
+        run: uv pip install -e '.[docs]'
 
       - name: Build docs
         run: sphinx-build docs ./docs/_build/html/

.github/workflows/test.yml

@@ -3,21 +3,29 @@ name: Testing Central Dogma Python
 on:
   push:
     branches:
-       - main
+      - main
   pull_request:
 
+env:
+  UV_SYSTEM_PYTHON: 1
+  UV_PYTHON_PREFERENCE: system
+
 jobs:
   docs:
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v4
+      - name: Install uv
+        uses: astral-sh/setup-uv@v3
+        with:
+          version: "0.5.1"
       - name: Set up Python
         uses: actions/setup-python@v5
         with:
-          python-version: 3.9
+          python-version: 3.13
       - name: Install dependencies
-        run: pip install -e '.[docs]'
-      - name : Build docs
+        run: uv pip install -e '.[docs]'
+      - name: Build docs
         run: sphinx-build docs ./docs/_build/html/
 
   linter:
@@ -35,7 +43,8 @@ jobs:
     strategy:
       matrix:
         os: [ubuntu-latest]
-        python-version: ["3.9", "3.10", "3.11", "3.12", "3.13", "pypy3.9", "pypy3.10"]
+        python-version:
+          ["3.9", "3.10", "3.11", "3.12", "3.13", "pypy3.9", "pypy3.10"]
 
     steps:
       - uses: actions/checkout@v4
@@ -46,14 +55,16 @@ jobs:
         uses: actions/setup-python@v5
         with:
           python-version: ${{ matrix.python-version }}
-          cache: "pip"
-          cache-dependency-path: "**/pyproject.toml"
+
+      - name: Install uv
+        uses: astral-sh/setup-uv@v3
+        with:
+          version: "0.5.1"
+          enable-cache: true
 
       - name: Install dependencies
         run: |
-          python -m pip install --upgrade pip
-          pip install -e .
-          pip install -e '.[dev]'
+          uv pip install -r pyproject.toml --extra dev
 
       - name: Test with pytest
         run: |
@@ -71,22 +82,25 @@ jobs:
     strategy:
       matrix:
         os: [macos-latest, windows-latest]
-        python-version: ["3.9", "3.10", "3.11","3.12", "3.13", "pypy3.9", "pypy3.10"]
+        python-version:
+          ["3.9", "3.10", "3.11", "3.12", "3.13", "pypy3.9", "pypy3.10"]
 
     steps:
       - uses: actions/checkout@v4
+      - name: Install uv
+        uses: astral-sh/setup-uv@v3
+        with:
+          version: "0.5.1"
+          enable-cache: true
+
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v5
         with:
           python-version: ${{ matrix.python-version }}
-          cache: "pip"
-          cache-dependency-path: "**/pyproject.toml"
 
       - name: Install dependencies
         run: |
-          python -m pip install --upgrade pip
-          pip install -e .
-          pip install -e '.[dev]'
+          uv pip install -r pyproject.toml --extra dev
 
       - name: Test with pytest
         run: |