diff --git a/dataservice/api/genomic_file/schemas.py b/dataservice/api/genomic_file/schemas.py index fa56b2c5..a37b0ae9 100644 --- a/dataservice/api/genomic_file/schemas.py +++ b/dataservice/api/genomic_file/schemas.py @@ -147,6 +147,34 @@ "QC Metrics", "WGS Metrics", "WXS Metrics", + "Annotated Germline Copy Number Segments", + "Annotated Tumor Only Mutation", + "Annotated Tumor Only Mutation Index", + "Denoised Germline Copy Ratios", + "Familial Relationships", + "Familial Relationships Report", + "Genotyped Germline Copy Number Intervals", + "Genotyped Germline Copy Number Intervals Index", + "Genotyped Germline Copy Number Segments", + "Genotyped Germline Copy Number Segments Index", + "Germline Copy Number Read Depth Stats", + "HLA Genotyping", + "Masked Tumor Only Mutation", + "Masked Tumor Only Mutation Index", + "Pre-pass Tumor Only Structural Variation", + "Pre-pass Tumor Only Structural Variation Index", + "Raw Germline Copy Number Segments", + "Raw Tumor Only Copy Number Segment", + "Raw Tumor Only Structural Variation", + "Raw Tumor Only Structural Variation Index", + "Raw Variant Call", + "Raw Variant Call Index", + "Tumor Only Assembled Haplotypes", + "Tumor Only Assembled Haplotypes Index", + "Tumor Only Copy Number BAF", + "Tumor Only Copy Number Ratio", + "Tumor Only Copy Number Variation", + "Tumor Only Structural Variation" } PAIRED_END_ENUM = {1, 2} @@ -160,6 +188,7 @@ "RNAseq-Analysis", "Single-VCF-Genotyping", "Somatic-Mutation", + "Tumor-Only-Mutation" } FILE_VERSION_DESCRIPTOR_ENUM = {